Bindings for core::io::sequence_comparation namespace

Classes
		builtins.object DesignContrast   class DesignContrast(builtins.object)     DesignContrast contains information for comparing the native protein sequence to designed protein sequence. And output the compare resultes to a special formated file which can be used for statistics calculations     Methods defined here: __init__(...) from builtins.PyCapsule __init__(*args, **kwargs) Overloaded function.   1. __init__(rosetta.core.io.sequence_comparation.DesignContrast) -> NoneType   2. __init__(self : rosetta.core.io.sequence_comparation.DesignContrast, dc : rosetta.core.io.sequence_comparation.DesignContrast) -> NoneType __new__(*args, **kwargs) from builtins.type Create and return a new object.  See help(type) for accurate signature. assign(...) from builtins.PyCapsule assign(self : rosetta.core.io.sequence_comparation.DesignContrast,  : rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.core.io.sequence_comparation.DesignContrast clear(...) from builtins.PyCapsule clear(rosetta.core.io.sequence_comparation.DesignContrast) -> NoneType   clear function to clear all datas in this class. getListNames(...) from builtins.PyCapsule getListNames(*args, **kwargs) Overloaded function.   1. getListNames(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_utility_file_FileName   2. getListNames(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_utility_file_FileName getNeighbors(...) from builtins.PyCapsule getNeighbors(*args, **kwargs) Overloaded function.   1. getNeighbors(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_int   Get number of neighbors for all residues in pose   2. getNeighbors(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_int getPdbCodes(...) from builtins.PyCapsule getPdbCodes(*args, **kwargs) Overloaded function.   1. getPdbCodes(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_std_string   2. getPdbCodes(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_std_string getPdbNames(...) from builtins.PyCapsule getPdbNames(*args, **kwargs) Overloaded function.   1. getPdbNames(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_utility_file_FileName   2. getPdbNames(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_utility_file_FileName getSecStruct(...) from builtins.PyCapsule getSecStruct(*args, **kwargs) Overloaded function.   1. getSecStruct(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_std_string   Get secondary structure for all residues in pose   2. getSecStruct(rosetta.core.io.sequence_comparation.DesignContrast) -> rosetta.utility.vector1_std_string output_sqc_file(...) from builtins.PyCapsule output_sqc_file(self : rosetta.core.io.sequence_comparation.DesignContrast, native_pose : rosetta.core.pose.Pose, decoy_pose : rosetta.core.pose.Pose, single_code : str, sqc : rosetta.std.basic_ofstream_char_std_char_traits_char_t) -> NoneType   this function will output the sequence comparing result between native pose and designed pose setNames(...) from builtins.PyCapsule setNames(rosetta.core.io.sequence_comparation.DesignContrast) -> NoneType   Get pdb file names from the pdb list files. setNeighbors(...) from builtins.PyCapsule setNeighbors(self : rosetta.core.io.sequence_comparation.DesignContrast, pose : rosetta.core.pose.Pose) -> NoneType   Set number of neighbors for all residues in pose setPdbCodes(...) from builtins.PyCapsule setPdbCodes(rosetta.core.io.sequence_comparation.DesignContrast) -> NoneType setSecStruct(...) from builtins.PyCapsule setSecStruct(self : rosetta.core.io.sequence_comparation.DesignContrast, pose : rosetta.core.pose.Pose) -> NoneType   Set secondary structure for all residues in pose