Module _protocols_helical_bundle_
Classes
BackboneGridSampler
BackboneGridSamplerAP
BackboneGridSamplerCAP
BackboneGridSamplerCreator
BackboneGridSamplerCreatorAP
BackboneGridSamplerCreatorCAP
BackboneGridSamplerHelper
BackboneGridSamplerHelperAP
BackboneGridSamplerHelperCAP
BundleGridSampler
BundleGridSamplerAP
BundleGridSamplerCAP
BundleGridSamplerCreator
BundleGridSamplerCreatorAP
BundleGridSamplerCreatorCAP
BundleGridSamplerHelper
BundleGridSamplerHelperAP
BundleGridSamplerHelperCAP
DoFType
FitSimpleHelix
FitSimpleHelixAP
FitSimpleHelixCAP
FitSimpleHelixCreator
FitSimpleHelixCreatorAP
FitSimpleHelixCreatorCAP
FitSimpleHelixMultiFunc
FitSimpleHelixMultiFuncAP
FitSimpleHelixMultiFuncCAP
MakeBundle
MakeBundleAP
MakeBundleCAP
MakeBundleCreator
MakeBundleCreatorAP
MakeBundleCreatorCAP
MakeBundleHelix
MakeBundleHelixAP
MakeBundleHelixCAP
MakeBundleHelixCreator
MakeBundleHelixCreatorAP
MakeBundleHelixCreatorCAP
PertType
PerturbBundle
PerturbBundleAP
PerturbBundleCAP
PerturbBundleCreator
PerturbBundleCreatorAP
PerturbBundleCreatorCAP
PerturbBundleHelix
PerturbBundleHelixAP
PerturbBundleHelixCAP
PerturbBundleHelixCreator
PerturbBundleHelixCreatorAP
PerturbBundleHelixCreatorCAP
PerturbBundleOptions
PerturbBundleOptionsAP
PerturbBundleOptionsCAP
SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase_T_core_chemical_ChemicalManager_TAP
SingletonBase_T_core_chemical_ChemicalManager_TCAP
__CPP_BackboneGridSamplerCreator__
__CPP_BackboneGridSamplerHelper__
__CPP_BackboneGridSampler__
__CPP_BundleGridSamplerCreator__
__CPP_BundleGridSamplerHelper__
__CPP_BundleGridSampler__
__CPP_FitSimpleHelixCreator__
__CPP_FitSimpleHelixMultiFunc__
__CPP_FitSimpleHelix__
__CPP_MakeBundleCreator__
__CPP_MakeBundleHelixCreator__
__CPP_MakeBundleHelix__
__CPP_MakeBundle__
__CPP_PerturbBundleCreator__
__CPP_PerturbBundleHelixCreator__
__CPP_PerturbBundleHelix__
__CPP_PerturbBundleOptions__
__CPP_PerturbBundle__
Functions
align_mainchain_atoms
align_mainchain_atoms_of_residue_range
copy_helix_bondangles
copy_helix_bondlengths
copy_helix_dihedrals
generate_atom_positions
place_atom_positions
read_minor_helix_params
write_minor_helix_params
Variables
__package__
bgsh_delta_omega0
bgsh_delta_omega1
bgsh_delta_t
bgsh_omega0
bgsh_r0
bgsh_undefined_dof
bgsh_z0_offset
bgsh_z1_offset
pt_gaussian
pt_undefined_perturbation
pt_uniform
[
hide private
]