Module _core_chemical_rna_
Classes
BaseEdge
ChiState
GaussianParameter
GaussianParameterAP
GaussianParameterCAP
PuckerState
RNA_FittedTorsionInfo
RNA_FittedTorsionInfoAP
RNA_FittedTorsionInfoCAP
RNA_ResidueType
RNA_ResidueTypeAP
RNA_ResidueTypeCAP
RNA_Torsion
Functions
add_values_from_center
chi1_torsion_atom
chi1_torsion_atom_index
convert_acgu_to_1234
default_jump_atom
first_base_atom
first_base_atom_index
get_WC_atom
get_edge_from_num
get_epsilon_torsions
get_full_LW_orientation_from_num
get_full_edge_from_num
get_full_orientation_from_num
get_full_torsions
get_orientation_from_num
get_residue_base_state
get_residue_pucker_state
get_rna_base_centroid
get_rna_base_coordinate_system
get_watson_crick_base_pair_atoms
is_base_phosphate_atom_pair
is_purine
possibly_canonical
possibly_canonical_strict
Variables
ALPHA
ANTI
ANY_BASE_EDGE
ANY_CHI
ANY_PUCKER
ANY_TORSION
BETA
CHI
DELTA
EPSILON
GAMMA
HOOGSTEEN
NORTH
NO_CHI
NO_PUCKER
NU1
NU2
O2H
O2PRIME
PHOSPHATE
SOUTH
SUGAR
SYN
WATSON_CRICK
ZETA
__package__
[
hide private
]