Index – S

s2d() (pyrosetta.rosetta.utility.subset_mapping method) same_ignoring_spaces() (in module pyrosetta.rosetta.utility) seekp() (pyrosetta.rosetta.basic.PyTracer method) (pyrosetta.rosetta.basic.Tracer method) send_char_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_double_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_doubles_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_integer_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_integers_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_size_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_sizes_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) send_string_to_node() (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.utility.SimulateMPI method) Set() (in module pyrosetta) set_abort_on_failed_loop() (pyrosetta.rosetta.protocols.LoopRebuild method) set_allowed_failure_before_extend() (pyrosetta.rosetta.protocols.LoopRebuild method) set_allowed_failure_before_stop() (pyrosetta.rosetta.protocols.LoopRebuild method) set_current_job() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) set_current_tag() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) set_default_final_stream() (pyrosetta.rosetta.basic.Tracer method) set_default_mc() (pyrosetta.rosetta.protocols.LoopRebuild method) set_default_settings() (pyrosetta.rosetta.protocols.LoopRebuild method) set_dimension() (pyrosetta.rosetta.numeric.MultiDimensionalHistogram method) set_extended_loop() (pyrosetta.rosetta.protocols.LoopRebuild method) set_indent() (pyrosetta.rosetta.basic.Emitter method) (pyrosetta.rosetta.basic.JsonEmitter method) (pyrosetta.rosetta.basic.YamlEmitter method) set_input_pose() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) set_ios_hook() (pyrosetta.rosetta.basic.Tracer method) set_logging_handler() (in module pyrosetta.logging_support) set_mpi_rank() (pyrosetta.rosetta.utility.SimulateMPI method) set_native_pose() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) set_new_final_stream() (pyrosetta.rosetta.basic.Tracer method) set_next_correspondence() (pyrosetta.rosetta.utility.subset_mapping method) set_random_loop_flag() (pyrosetta.rosetta.protocols.LoopRebuild method) set_source_size() (pyrosetta.rosetta.utility.subset_mapping method) set_svn_version_and_url() (in module pyrosetta.rosetta.core) set_type() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) short_of() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) show() (pyrosetta.rosetta.protocols.LoopRebuild method) (pyrosetta.rosetta.protocols.LoopRefine method) show_time() (in module pyrosetta.rosetta.basic) sign() (in module pyrosetta.rosetta.numeric) (in module pyrosetta.rosetta.ObjexxFCL) simulate_mpi() (pyrosetta.rosetta.utility.SimulateMPI method) simulate_mpi_message_type (class in pyrosetta.rosetta.utility) SimulateMPI (class in pyrosetta.rosetta.utility) sin_cos_range() (in module pyrosetta.rosetta.numeric) size() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Cstring method) (pyrosetta.rosetta.ObjexxFCL.DynamicIndexRange method) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) (pyrosetta.rosetta.ObjexxFCL.IndexRange method) (pyrosetta.rosetta.ObjexxFCL.StaticIndexRange method) sized() (in module pyrosetta.rosetta.ObjexxFCL)

slurp() (in module pyrosetta.rosetta.utility) source_id_is_mapped() (pyrosetta.rosetta.utility.subset_mapping method) source_size() (pyrosetta.rosetta.utility.subset_mapping method) space() (in module pyrosetta.rosetta.ObjexxFCL) split() (in module pyrosetta.rosetta.utility) split_by_newlines() (in module pyrosetta.rosetta.utility) split_to_list() (in module pyrosetta.rosetta.utility) split_to_set() (in module pyrosetta.rosetta.utility) split_whitespace() (in module pyrosetta.rosetta.utility) square() (in module pyrosetta.rosetta.ObjexxFCL) Star (class in pyrosetta.rosetta.ObjexxFCL) start() (pyrosetta.rosetta.numeric.MultiDimensionalHistogram method) start_doc() (pyrosetta.rosetta.basic.Emitter method) (pyrosetta.rosetta.basic.JsonEmitter method) (pyrosetta.rosetta.basic.YamlEmitter method) start_list() (pyrosetta.rosetta.basic.Emitter method) (pyrosetta.rosetta.basic.JsonEmitter method) (pyrosetta.rosetta.basic.YamlEmitter method) start_map() (pyrosetta.rosetta.basic.Emitter method) (pyrosetta.rosetta.basic.JsonEmitter method) (pyrosetta.rosetta.basic.YamlEmitter method) startswith() (in module pyrosetta.rosetta.utility) StaticIndexRange (class in pyrosetta.rosetta.ObjexxFCL) str_dn() (in module pyrosetta.rosetta.ObjexxFCL) str_dncase() (in module pyrosetta.rosetta.ObjexxFCL) str_up() (in module pyrosetta.rosetta.ObjexxFCL) str_upcase() (in module pyrosetta.rosetta.ObjexxFCL) string2float() (in module pyrosetta.rosetta.utility) string2int() (in module pyrosetta.rosetta.utility) string2Real() (in module pyrosetta.rosetta.utility) string2Size() (in module pyrosetta.rosetta.utility) string2uint() (in module pyrosetta.rosetta.utility) string_of() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) string_split() (in module pyrosetta.rosetta.utility) string_split_multi_delim() (in module pyrosetta.rosetta.utility) string_split_simple() (in module pyrosetta.rosetta.utility) string_to_sha1() (in module pyrosetta.rosetta.utility) strip() (in module pyrosetta.rosetta.ObjexxFCL) (in module pyrosetta.rosetta.utility) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) strip_whitespace() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) stripped() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) stripped_whitespace() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Fstring method) (pyrosetta.rosetta.ObjexxFCL.Fsubstring method) subset_mapping (class in pyrosetta.rosetta.utility) subtract_degree_angles() (in module pyrosetta.rosetta.basic) subtract_radian_angles() (in module pyrosetta.rosetta.basic) super_mute() (pyrosetta.rosetta.basic.Tracer method) suppress_CSI_codes() (pyrosetta.rosetta.utility.CSI_Sequence method) swap() (in module pyrosetta.rosetta.ObjexxFCL) (in module pyrosetta.rosetta.std) (pyrosetta.rosetta.ObjexxFCL.Cstring method) (pyrosetta.rosetta.ObjexxFCL.Dimension method) (pyrosetta.rosetta.ObjexxFCL.DynamicIndexRange method) (pyrosetta.rosetta.ObjexxFCL.StaticIndexRange method) swap4_aligned() (in module pyrosetta.rosetta.utility) swap_no_notify() (in module pyrosetta.rosetta.ObjexxFCL) (pyrosetta.rosetta.ObjexxFCL.Dimension method) (pyrosetta.rosetta.ObjexxFCL.DynamicIndexRange method) sys_sleep() (in module pyrosetta.rosetta.utility)