core.init: Mini-Rosetta version 52530 from https://svn.rosettacommons.org/source/trunk/rosetta/rosetta_source core.init: command: condor_exec.exe -seed_offset 6 -database /home/rosie/rosie/rosie.back/data/antibody/rosetta_database -s FR_0001.pdb -scorefile score.sf -multiple_processes_writing_to_one_directory -ex1 -ex2 -antibody::remodel perturb_kic -antibody::snugfit true -antibody::refine refine_kic -antibody::cter_insert false -antibody::flank_residue_min true -antibody::h3_filter true -antibody::h3_filter_tolerance 20 -antibody::h3_no_stem_graft true -nstruct 50 core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-22682639 seed_offset=6 real_seed=-22682633 core.init.random: RandomGenerator:init: Normal mode, seed=-22682633 RG_type=mt19937 protocols.antibody2.AntibodyModelerProtocol: Setting Up defaults.......... protocols.antibody2.AntibodyModelerProtocol: Start Reading and Setting Options ... protocols.antibody2.AntibodyModelerProtocol: Finish Reading and Setting Options !!! core.scoring.etable: Starting energy table calculation core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6) core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6) core.scoring.etable: Finished calculating energy tables. basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBPoly1D.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBFadeIntervals.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBEval.csv basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN6_mem_env_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN10_mem_env_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/memcbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/mem_pair_log.txt basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4 protocols.antibody2: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2: /// protocols.antibody2: /// Rosetta 3 Antibody Modeler /// protocols.antibody2: /// /// protocols.antibody2: /// camelid : 0 protocols.antibody2: /// protocols.antibody2: /// ****** model_h3 : 1 protocols.antibody2: /// h3_perturb_type = 'perturb_kic' protocols.antibody2: /// cter_insert = 0 protocols.antibody2: /// h3_filter = 1 protocols.antibody2: /// protocols.antibody2: /// ****** snugfit : 1 protocols.antibody2: /// LH_repulsive_ramp = 1 protocols.antibody2: /// protocols.antibody2: /// ****** refine_h3 : 1 protocols.antibody2: /// h3_refine_type = 'refine_kic' protocols.antibody2: /// h3_filter = 1 protocols.antibody2: /// h3_filter_tolerance = 20 protocols.antibody2: /// protocols.antibody2: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2: protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 1 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 2 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 3 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 4 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 5 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 6 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 7 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 8 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 9 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 10 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 11 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 12 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 13 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 14 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 15 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 16 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 17 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 18 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 19 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 20 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 21 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 22 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 23 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 24 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 25 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 26 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 27 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 28 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 29 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 30 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 31 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 32 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 33 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 34 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 35 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 36 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 37 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 38 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 39 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 40 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 41 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 42 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 43 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 44 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 45 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 46 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 47 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 48 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 49 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 50 protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job protocols.jd2.PDBJobInputter: filling pose from PDB FR_0001.pdb core.chemical.ResidueTypeSet: Finished initializing fa_standard residue type set. Created 6352 residue types core.conformation.Conformation: Found disulfide between residues 132 206 core.conformation.Conformation: current variant for 132 CYS core.conformation.Conformation: current variant for 206 CYS core.conformation.Conformation: current variant for 132 CYD core.conformation.Conformation: current variant for 206 CYD core.pack.task: Packer task: initialize from command line() protocols.antibody2.AntibodyModelerProtocol: AAAAAAAA cst_weight: 0 protocols.antibody2.AntibodyModelerProtocol: Danger Will Robinson! Native is an impostor! protocols.antibody2.AntibodyModelerProtocol: 'native_pose' is just a copy of the 'input_pose' protocols.antibody2.AntibodyModelerProtocol: since you didn't sepcifiy the native pdb name antibody2.AntibodyInfo: Successfully finished the CDR defintion antibody2.AntibodyInfo: AC Detecting Regular CDR H3 Stem Type antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: KINKED antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: Kink: 1 Extended: 0 protocols.antibody2.AntibodyModelerProtocol: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2.AntibodyModelerProtocol: /// Rosetta Antibody Info /// protocols.antibody2.AntibodyModelerProtocol: /// /// protocols.antibody2.AntibodyModelerProtocol: /// Antibody Type: Regular Antibody protocols.antibody2.AntibodyModelerProtocol: /// Predict H3 Cterminus Base: KINKED protocols.antibody2.AntibodyModelerProtocol: /// protocols.antibody2.AntibodyModelerProtocol: /// H1 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 10 protocols.antibody2.AntibodyModelerProtocol: /// sequence: GYTFTNYGMN protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 136 145 141 0 0 protocols.antibody2.AntibodyModelerProtocol: /// H2 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 17 protocols.antibody2.AntibodyModelerProtocol: /// sequence: WINTYTGEPTYADDFKE protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 160 176 168 0 0 protocols.antibody2.AntibodyModelerProtocol: /// H3 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 14 protocols.antibody2.AntibodyModelerProtocol: /// sequence: DYYGSTYPYYAMDY protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 209 222 210 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L1 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 12 protocols.antibody2.AntibodyModelerProtocol: /// sequence: RASSSVSSSYLH protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 24 35 30 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L2 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 7 protocols.antibody2.AntibodyModelerProtocol: /// sequence: STSNLAS protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 51 57 54 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L3 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 9 protocols.antibody2.AntibodyModelerProtocol: /// sequence: QQYSGYPYT protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 90 98 94 0 0 protocols.antibody2.AntibodyModelerProtocol: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2.AntibodyModelerProtocol: protocols.antibody2.H3CterInsert: Reading CDR H3 C-ter Fragments protocols.antibody2.H3CterInsert: LOOP 209 222 210 0 0 protocols.antibody2.H3CterInsert: cdr_h3_size=14 protocols.antibody2.H3CterInsert: aa_1name.size()=18 protocols.antibody2.H3CterInsert: ARDYYGSTYPYYAMDYWG protocols.antibody2.H3CterInsert: Finished reading CDR H3 C-ter Fragments protocols.antibody2.ModelCDRH3: Applying CDR H3 modeler antibody2.AntibodyUtil: Utility: Setting up simple one loop fold tree antibody2.AntibodyUtil: Utility: Finished setting up simple one loop fold tree core.chemical.ResidueTypeSet: Finished initializing centroid residue type set. Created 1980 residue types core.conformation.Conformation: Found disulfide between residues 22 96 core.conformation.Conformation: current variant for 22 CYS core.conformation.Conformation: current variant for 96 CYS core.conformation.Conformation: current variant for 22 CYD core.conformation.Conformation: current variant for 96 CYD core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: ALL_LOOPS:LOOP begin end cut skip_rate extended protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: SELECTEDLOOPS:LOOP begin end cut skip_rate extended protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: protocols.loops.loops_main: Pose fold tree FOLD_TREE EDGE 1 207 -1 EDGE 207 210 -1 EDGE 207 224 1 EDGE 224 211 -1 EDGE 224 232 -1 protocols.loops.loops_main: protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Setting extended torsions: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop attempt: 0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: perturb_one_loop_with_KIC: 209 14 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel init temp: 2 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel final temp: 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: kinematic initial perturb with start_res: 209 middle res: 215 end_res: 222 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd before initial kinematic perturbation:0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Attempting loop building: 0 ... protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: initial kinematic perturbation complete protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd after initial kinematic perturbation:8.46232 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -53.161 -53.161 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.58234 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.55151 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.6699 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.79585 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.77999 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.80102 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.68621 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.68104 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.87288 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93015 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.91641 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.88821 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86744 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.87276 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.84553 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.85158 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60218 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68297 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68746 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05134 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.10276 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21409 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.22195 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93672 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.05655 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.07587 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.55254 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.52729 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.61077 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.65415 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.61769 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.69144 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.64736 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.66023 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.65889 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.66857 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.66846 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.69083 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68621 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.38631 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39612 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39642 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.39513 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38237 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38962 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38397 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.36617 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.35988 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38536 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.3859 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.43494 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.73472 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.72502 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.71716 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.72103 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.71499 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.72702 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.0609 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.06614 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.18154 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3743 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37406 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3814 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4016 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.12755 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20887 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20287 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20406 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76982 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77783 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77097 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77901 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.33614 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.32922 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.20053 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.96258 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2054 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2112 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2442 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2426 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.4908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.74806 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.85039 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.498 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.65204 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.74172 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68254 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52488 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42844 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3753 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.39052 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3982 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01727 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01423 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92373 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77331 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77284 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7597 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90682 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88223 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84752 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70026 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71703 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72433 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72552 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65914 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.00863 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23921 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14278 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14128 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48527 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.49728 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.00964 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01528 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04808 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10109 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02772 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.0243 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02387 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02358 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03406 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.93542 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86194 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86213 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9405 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13886 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14056 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14662 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14676 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96833 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.973 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.91176 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8968 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.87759 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8765 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95293 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.9419 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.94651 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.94915 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02572 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03278 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03214 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.56933 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96867 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.97705 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98675 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29784 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.16378 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.17022 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.17654 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.17584 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.17948 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29604 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29625 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.26652 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.2793 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.28196 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.21931 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23784 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.2307 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23053 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.21622 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.45227 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.45515 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.46689 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4566 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34215 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34058 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34382 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.35024 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37434 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32926 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.26371 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27093 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.25864 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.25821 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27707 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36082 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60806 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61102 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6196 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62511 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.59173 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58629 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58624 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.57004 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.89064 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.87969 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.98683 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.98716 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.98686 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23216 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2323 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28153 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.30879 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.38813 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37032 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23974 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23355 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85756 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85431 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09534 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.0931 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.1751 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16377 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.93178 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95575 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.96933 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.2742 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.2721 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33554 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.31768 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.31303 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33728 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95188 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.88988 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8847 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.92163 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8053 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.82969 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.79515 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.78671 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.78839 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.768 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.75272 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.752 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.76442 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.60137 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.57964 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.58363 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.42624 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.42654 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.42748 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.38223 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.37336 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.62273 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.62314 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.02746 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.69078 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.69359 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.69915 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.7344 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.74941 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.77892 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.68245 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.03531 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.13908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.09776 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.10599 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04118 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04224 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.06211 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.06706 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.59312 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.59138 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.57267 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66102 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.97828 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98139 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62559 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62669 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70743 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.01378 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.00752 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.12929 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.12903 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.15375 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.15008 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.06038 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.05923 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.11018 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.0494 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.05406 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.15176 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.15606 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.15462 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20805 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.18224 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.1889 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7055 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70517 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78857 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78599 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77199 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76531 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77951 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8705 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86795 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.896 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90089 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89397 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90366 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.05294 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.08634 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.08009 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.32908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.33336 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.33568 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.33669 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68324 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68277 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.6794 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.67657 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78201 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87074 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85257 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85047 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84919 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84707 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68822 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71347 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64504 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62459 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61606 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.81006 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.80975 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.82772 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.7413 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.7305 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.75357 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.75954 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.8137 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.81976 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.59447 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.63198 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.63114 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.62737 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.62624 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.62683 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36081 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.35472 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.28766 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.55335 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.35254 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.35169 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34897 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.19429 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16428 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23927 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.15037 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.1505 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.15011 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14839 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71946 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72029 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71232 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70727 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71217 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76257 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63657 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52816 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2775 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27301 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27249 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3029 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.30695 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86567 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.92217 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2255 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50557 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50605 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93666 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92498 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.83037 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99377 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99617 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04683 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04054 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29493 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.31525 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29473 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.08631 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04727 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.0028 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.00026 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99604 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99681 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99388 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99714 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.00309 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81945 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81624 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.83234 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.83653 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.84093 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.84464 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.84662 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.96933 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.04859 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.04422 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.07669 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.05143 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.04552 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40294 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40322 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.39388 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.38183 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.96838 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.96736 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.96677 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.32159 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.31784 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3186 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42269 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42577 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42641 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79148 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78789 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78625 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78117 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78326 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78662 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82823 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.83582 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77754 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65077 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65251 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.58232 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.97468 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96302 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04273 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03963 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90312 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89434 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23346 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23013 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.28947 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.6421 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.64292 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.60921 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63072 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65827 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63864 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63843 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63868 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63069 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62497 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.61688 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.61494 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.14569 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.06843 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.06778 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.02752 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.9921 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.02837 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04208 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04257 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04268 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.03454 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.03724 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.05275 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.05499 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.05728 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.15092 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.15295 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.18493 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.18484 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.90091 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.04221 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.72992 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.72439 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.72377 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.59439 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.5905 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.59064 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.59765 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.61727 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.59914 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.60072 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.55228 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09425 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22328 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2052 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4475 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49281 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49119 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49078 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.45826 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.44271 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89139 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89416 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77502 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.69997 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71653 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25757 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.44821 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.43255 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.51438 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.51668 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.84038 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.37572 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.37366 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36156 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36596 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36804 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36514 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36712 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36984 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.31821 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.30435 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.31075 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.3112 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.30984 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.44857 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.46049 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.35143 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.44373 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.44983 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.24686 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.23576 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.21732 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.2142 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.21321 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.22156 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.47908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.48155 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.45854 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.48419 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.46598 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42514 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.40469 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.51832 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.51575 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.53642 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.61454 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.61023 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.51325 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.55087 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.54805 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.51479 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.45058 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.4629 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.43547 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.43722 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.43581 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.44401 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42031 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42471 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.0958 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.08349 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.05313 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: result of loop closure:0 success, 3 failure 0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Loopstat: 209 222 209 222 14 time 192.0 0 time 0.0 -85.427 ext protocols.antibody2.ModelCDRH3: Finished Modeling Centroid CDR H3 loop protocols.antibody2.ModelCDRH3: Finished applying CDR H3 modeler protocols::checkpoint: Deleting checkpoints of LoopMover protocols.antibody2.CDRsMinPackMin: FOLD_TREE EDGE 1 23 -1 EDGE 23 36 1 EDGE 23 30 -1 EDGE 36 31 -1 EDGE 36 50 -1 EDGE 50 58 2 EDGE 50 54 -1 EDGE 58 55 -1 EDGE 58 89 -1 EDGE 89 99 3 EDGE 89 94 -1 EDGE 99 95 -1 EDGE 99 135 -1 EDGE 135 146 4 EDGE 135 141 -1 EDGE 146 142 -1 EDGE 146 159 -1 EDGE 159 177 5 EDGE 159 168 -1 EDGE 177 169 -1 EDGE 177 208 -1 EDGE 208 223 6 EDGE 208 210 -1 EDGE 223 211 -1 EDGE 223 232 -1 protocols.antibody2.CDRsMinPackMin: protocols.loops.loops_main: Added cutpoint variants: RES: 30 protocols.loops.loops_main: Added cutpoint variants: RES: 54 protocols.loops.loops_main: Added cutpoint variants: RES: 94 protocols.loops.loops_main: Added cutpoint variants: RES: 141 protocols.loops.loops_main: Added cutpoint variants: RES: 168 protocols.loops.loops_main: Added cutpoint variants: RES: 210 basic.io.database: Database file opened: scoring/score_functions/disulfides/fa_SS_distance_score core.pack.dunbrack: Dunbrack library took 0.07 seconds to load from binary antibody2.AntibodyUtil: Utility: Setting Up Packer Task antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 4174 rotamers at 147 positions. core.pack.pack_rotamers: IG: 7409844 bytes protocols.antibody2.RefineBetaBarrel: start finalize_setup function ... antibody2.AntibodyUtil: Utility: Setting Up Packer Task antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task core.pack.task: Packer task: initialize from command line() protocols.antibody2.RefineBetaBarrel: FOLD_TREE EDGE 1 23 -1 EDGE 23 30 -1 EDGE 23 36 2 EDGE 36 31 -1 EDGE 36 50 -1 EDGE 50 54 -1 EDGE 50 58 3 EDGE 58 55 -1 EDGE 58 87 -1 EDGE 87 89 -1 EDGE 89 94 -1 EDGE 87 134 1 EDGE 134 111 -1 EDGE 89 99 4 EDGE 99 95 -1 EDGE 99 110 -1 EDGE 134 135 -1 EDGE 135 141 -1 EDGE 135 146 5 EDGE 146 142 -1 EDGE 146 159 -1 EDGE 159 168 -1 EDGE 159 177 6 EDGE 177 169 -1 EDGE 177 208 -1 EDGE 208 210 -1 EDGE 208 223 7 EDGE 223 211 -1 EDGE 223 232 -1 protocols.antibody2.RefineBetaBarrel: protocols.loops.loops_main: Added cutpoint variants: RES: 30 protocols.loops.loops_main: Added cutpoint variants: RES: 54 protocols.loops.loops_main: Added cutpoint variants: RES: 94 protocols.loops.loops_main: Added cutpoint variants: RES: 141 protocols.loops.loops_main: Added cutpoint variants: RES: 168 protocols.loops.loops_main: Added cutpoint variants: RES: 210 protocols.antibody2.RefineBetaBarrel: finish finalize_setup function !!! protocols.antibody2.LHRepulsiveRamp: start apply function ... protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 1: rep_weight = 0.02 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.02) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 2: rep_weight = 0.10284 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.10284) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 3: rep_weight = 0.18568 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: finish apply function !!! protocols.antibody2.RefineBetaBarrel: finish repulsive ramping ! protocols.docking.DockMCMProtocol: in DockMCMProtocol.apply protocols.docking.DockMCMProtocol: Using the DockingTaskFactory. protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 5 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1215 rotamers at 46 positions. core.pack.pack_rotamers: IG: 1263804 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1167 rotamers at 46 positions. core.pack.pack_rotamers: IG: 1221580 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1167 rotamers at 46 positions. core.pack.pack_rotamers: IG: 1221580 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1195 rotamers at 44 positions. core.pack.pack_rotamers: IG: 1221600 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1227 rotamers at 45 positions. core.pack.pack_rotamers: IG: 1247752 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1134 rotamers at 44 positions. core.pack.pack_rotamers: IG: 1147256 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() protocols.antibody2.RefineBetaBarrel: finish L_H Docking ! protocols.antibody2.RefineBetaBarrel: FINISH BETA BARREL REFINEMENT STEP !! antibody2.AntibodyUtil: Utility: Setting up simple fold tree antibody2.AntibodyUtil: Utility: Finished setting up simple fold tree protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -278.433 -278.433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -278.433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.08296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.07338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.01369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.6611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.6437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.63423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.65204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.6866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.63037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.58 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.079 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1416 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1669008 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.174 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.174 -289.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.19 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.97601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.426 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1521 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2034312 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.426 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.426 -289.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.84451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.25232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.16397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1472 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1903144 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.321 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.321 -290.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.28296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.29 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.28193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.29254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.89 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.31455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.31592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.3532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.36066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44875 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.4531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.46173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.45882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.46501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.336 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1464 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1855180 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.336 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.336 -290.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.46612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.46584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.32703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.38803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.302 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.66193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.318 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1490 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1844900 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.346 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.346 -295.223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.86312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.019 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1430 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1786720 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.714 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.714 -295.223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.215 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1425 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1775644 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.215 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.215 -295.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -295.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.6104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.87 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.973 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1448 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1843588 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.973 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.973 -295.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.51728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.44 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.86632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.36 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1475 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1769724 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.829 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.829 -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81957 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79998 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.313 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1478 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1773420 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.313 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.313 -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.24 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.09 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1526 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1822572 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.09 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.09 -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7925 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1468 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1741228 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.309 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.309 -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.904 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1477 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1747728 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.904 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.904 -298.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.86338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1510 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1867436 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.366 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.366 -298.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -298.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84129 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.783 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.759 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1435 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1561100 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.759 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.759 -298.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.67811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.66585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.64031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.358 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.53 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.658 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1474 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1747528 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.662 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.662 -298.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.6901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.984 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1476 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1761012 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.984 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.984 -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.67987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.887 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1455 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1620836 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.887 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.887 -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.67762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.65534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.65946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.65892 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.67553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1450 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1604912 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.318 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.318 -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.358 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.76 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1459 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1697300 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.084 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.084 -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.6908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.713 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1483 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1809428 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.713 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.713 -298.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.713 protocols.moves.TrialCounter: kic_refine_r1 trials= 361; accepts= 0.4072; energy_drop/trial= -0.03533 protocols.moves.TrialCounter: kic_refine_r2 trials= 361; accepts= 0.3573; energy_drop/trial= -0.00789 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -1.47771 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 174.37 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 2 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.607 -274.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.725007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.746018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.727629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.92259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -272.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.3717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -273.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.20399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.23251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.60598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.604 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.25855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.30106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.568 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1615 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2462496 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.568 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.568 -288.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.2768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.06161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.65 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.07496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.384 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.56097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.5504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.54703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67325 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.983 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1453 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1556340 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.983 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.983 -288.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.84379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.72189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.88215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.588 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1447 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1621876 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.588 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.588 -292.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.90115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.89747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.89175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.97022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1441 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1591296 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.885 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.885 -294.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.14503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99228 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.59 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.01794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.02536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.02648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.842 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1460 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1586372 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.855 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.855 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.13 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96481 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.86837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.262 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.92818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1463 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1615320 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -279.103 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.529 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.92236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.73 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.92515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.84935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.94197 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.89704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.89398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.90311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.90643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1432 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1526388 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.721 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.721 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1472 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1638296 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.977 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.977 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.94658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.91374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.66115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.299 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1447 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1571644 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.182 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.182 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.789 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.75137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.5729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.59076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.49307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.56734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1778772 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.748 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.748 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.57493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.54703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.32 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.55665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.57935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.56479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1463 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1617584 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.286 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.286 -295.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.56652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.55945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.5724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.65554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1505 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1795748 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.121 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.121 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.72174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.72121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74801 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.76973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.89 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.76475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.7725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1494 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1730416 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.985 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.985 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.57122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1457 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1613232 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.399 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.399 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.56 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.051 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1475 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1695668 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.146 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.146 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1472 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1682564 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.714 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.714 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.92 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.61155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.61759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1492 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1747560 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.886 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.886 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.65756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1493 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1747500 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.611 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.611 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.66953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.53919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.59697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.77764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.075 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.77681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.59 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.474 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1476 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1666684 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.765 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.765 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.72973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.72309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67129 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.66583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1475 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1701084 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.314 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.314 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.66946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.48 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.63855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1470 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1654160 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.758 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.758 -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.758 protocols.moves.TrialCounter: kic_refine_r1 trials= 369; accepts= 0.3144; energy_drop/trial= -0.04886 protocols.moves.TrialCounter: kic_refine_r2 trials= 372; accepts= 0.3145; energy_drop/trial= 0.00149 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9545; energy_drop/trial= -1.58442 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 159.529 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.613 -274.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.58327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.49945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.67959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.68 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.6142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.62503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.5887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.37843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.37944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1402 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1491600 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -281.863 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -281.863 -286.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -281.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49262 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.3546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.34119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.47856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1446 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1737812 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.247 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.247 -289.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.42 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.91 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1451 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1794408 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.91 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.91 -289.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.65675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.367 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.73 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1449 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1802640 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.512 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.512 -289.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.197 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.415 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.345 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1431 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1735880 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.345 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.345 -289.787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.71076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35384 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.056 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1420 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1677660 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.056 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.056 -290.056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1464 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1798508 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.709 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.709 -290.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -290.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.55 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.112 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1422 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1689992 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -281.858 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.112 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37957 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1393 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1601460 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.239 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.157 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.65 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.48 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.061 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1396 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1617908 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.305 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.305 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.36 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.532 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1397 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1647980 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.532 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.532 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.2 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46389 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1393 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1605740 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.041 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.041 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1408 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1660424 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.766 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.766 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.87 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.54 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1412 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1703476 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.491 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.491 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -290.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01783 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1372 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1539268 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.562 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.562 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.66 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.732 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.876 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1440 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1753504 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.918 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.918 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.11 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.401 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.365 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1425 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1717948 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.386 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.386 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.576 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1421 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1688376 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.576 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.576 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1416 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1678600 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.697 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.09 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0783 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.93722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.783 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1474 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1841980 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.674 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.528 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.51 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99732 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1433 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1730104 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.253 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.253 -290.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.253 protocols.moves.TrialCounter: kic_refine_r1 trials= 352; accepts= 0.3977; energy_drop/trial= -0.03369 protocols.moves.TrialCounter: kic_refine_r2 trials= 357; accepts= 0.3193; energy_drop/trial= 0.01046 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.8182; energy_drop/trial= -1.52714 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -159.796 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.536 -274.536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.04865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.04459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.03465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.41 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.41599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.60722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.72696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.9 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1469 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1650832 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -280.768 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -280.768 -287.635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -280.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1594 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2101048 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.714 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.714 -290.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.8485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.789 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.8739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.439 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.77255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.317 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1374 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1557432 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.321 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.321 -290.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.84 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.85 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.77643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.117 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.669 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1369 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1569288 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.855 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.855 -291.053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1375 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1553664 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.192 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.192 -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1384 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1588532 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.026 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.026 -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.70476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1376 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1564732 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.042 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.042 -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.456 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1366 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1520912 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.684 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.684 -294.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.19 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.92 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1376 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1504004 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.809 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.809 -294.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.21122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.18601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.20347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.20465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.51014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.302 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.49737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48326 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.5272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62367 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.183 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1447 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1683756 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.183 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.183 -294.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.85176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.81834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.002 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.465 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1392 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1541708 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.465 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.465 -296.465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.59677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.57084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.38 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.279 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1398 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1533392 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.279 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.279 -296.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.62149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.61312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.63631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.57455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.55359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.56623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.54172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1433 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1626048 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.268 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.268 -296.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.59986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.55238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.656 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.49499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.50706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.5135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.53942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.52099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.44829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.44908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.08 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.3982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.661 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1339 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1408772 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.662 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.662 -296.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -296.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.59945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.967 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1420 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1598144 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.967 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.967 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.66549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1437 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1655484 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.361 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.361 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.72387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.78826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74401 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.77777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1442 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1672284 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.668 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.668 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.772 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1384 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1503584 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.772 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.772 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.5985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.801 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.59566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.55271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.23134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.30853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.5585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1279 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1379732 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.162 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.162 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.57132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.58271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.58892 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.61125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.459 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1279 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1387880 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.459 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.459 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.302 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.78824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.52559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.4798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1365 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1469532 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.838 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.838 -296.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.838 protocols.moves.TrialCounter: kic_refine_r1 trials= 356; accepts= 0.3371; energy_drop/trial= -0.03337 protocols.moves.TrialCounter: kic_refine_r2 trials= 357; accepts= 0.3333; energy_drop/trial= -0.01459 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -1.54451 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 155.894 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.512 -274.512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.604 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.909 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1456 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1640952 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.909 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.909 -290.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.68 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1446 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1618384 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.536 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.536 -291.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.84 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1446 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1608908 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.238 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.238 -291.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.703 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1527 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1708228 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.765 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.765 -291.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23116 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.892 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.33 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1493 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1770700 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.331 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.331 -291.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.5632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.479 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1423 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1641772 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.479 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.479 -291.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.98394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00228 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.99177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.93758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.36 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.99914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.853 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1408 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1610212 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.853 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.853 -291.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -291.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.98098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1455 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1695160 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.026 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.026 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.95338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.592 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1458 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1704552 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.592 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.592 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.21936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.19852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.1628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.18051 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1452 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1689680 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.855 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.855 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.403 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1431 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1650040 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.403 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.403 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.786 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1447 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1718420 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.786 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.786 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1338 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1453356 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.267 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.267 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.876 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.06 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1340 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1460732 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.06 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.06 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -291.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96749 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.95798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.89 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1421 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1643228 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.607 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.607 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.0097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.02429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.201 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.98304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.01121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.02073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.01588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.03701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.04509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.06 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1512 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1738004 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.197 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.197 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.197 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.94879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1511 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1777192 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.014 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.073 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1518 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1798120 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.824 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.824 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.94101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.08 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.87798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.607 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1520 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1797068 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.607 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.607 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.116 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75165 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1506 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1733748 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.784 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.784 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.52 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89127 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.948 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1521 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1764280 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.948 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.948 -292.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.948 protocols.moves.TrialCounter: kic_refine_r1 trials= 376; accepts= 0.3378; energy_drop/trial= -0.03150 protocols.moves.TrialCounter: kic_refine_r2 trials= 369; accepts= 0.3144; energy_drop/trial= 0.00230 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9545; energy_drop/trial= -1.47019 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 174.198 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 6 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.535 -274.535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.758071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.793558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.49224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.50621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.50626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.75 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.851 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1510 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1905748 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.851 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.851 -287.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.27486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.8046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.67 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.54 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.93225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.094 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1497 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1949512 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.094 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.094 -290.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.66767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.41 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.67681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.72772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.93926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.74821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.85889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1489 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1941868 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.218 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.218 -290.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.07753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1433 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1710760 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.195 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.195 -291.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.93452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.98627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.08741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.035 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1491 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1927772 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.242 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.242 -292.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04508 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.002 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.17259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19072 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.17642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.48391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.46768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.33451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.02463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1343 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1461344 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.21 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.21 -293.21 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.21 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.00381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.01788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.415 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.98799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.62008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.57644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.60299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.56965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.61007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1330 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1527472 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.786 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.786 -294.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -294.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.6497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.62562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.64967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.62432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.64655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.29 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.84238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.81375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.8255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.78873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.85761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.88868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.99264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.96988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.98487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.239 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1328 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1538516 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.231 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.231 -295.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.97446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.98435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.99148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.95992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.98233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.96888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.98248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.92 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.00928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.98931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.01511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.98848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.96053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.9717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.91215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.89423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.91806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.90414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1360 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1668948 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.394 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.394 -297.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.88919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.89059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.88884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.87015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.87689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.8636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.88507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.86646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1351 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1629468 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.288 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.288 -297.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.88436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.90387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.89627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.96667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.02662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1333 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1563696 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.899 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.899 -297.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.99804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.02448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.02985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.01674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.04253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.02619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.04167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.01904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.0267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.36 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.04834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.01553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.01989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.635 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1366 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1679760 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.624 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.624 -298.111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.25613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.21524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.22808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.19859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.502 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.20569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.18234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.19143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.09308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.04503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.04989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.775 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1365 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1625828 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.775 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.775 -298.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.07929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.19807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.23919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.21705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.2259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.20719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.825 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1289 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1393152 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.825 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.825 -298.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -298.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.07408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.08188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.07947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.08653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.48 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.08675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.09776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.11606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.10132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.11959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.11186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.12068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1345 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1564408 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.151 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.151 -298.304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.08862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.358 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.09559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.09996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.10368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.08416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.08677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.08405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.10324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.09937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.33 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.1125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.18626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.18014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.872 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1355 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1595796 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.872 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.872 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.15448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.15033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.13813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.13668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.18765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.1716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.17313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1338 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1553052 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.969 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.969 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.20691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.2067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.21423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.20563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.21997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.19762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.22162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.34735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.33896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.3497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.35101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.998 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1342 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1617116 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.998 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.998 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.998 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.36078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.34835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.36601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.34865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.24398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.25839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.24236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.1745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.19785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.91847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.7728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.655 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1359 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1664152 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.64 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.64 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.79849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.78136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.78885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.81949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.80383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.9221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.90258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.91598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.88854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.9334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1358 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1654532 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.78 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.78 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.80226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.92709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.93102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.96517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.99663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.98883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.02498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.0133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.99921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.02094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.01345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.02517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.03446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1382 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1748648 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.241 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.241 -298.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.241 protocols.moves.TrialCounter: kic_refine_r1 trials= 388; accepts= 0.3351; energy_drop/trial= -0.05149 protocols.moves.TrialCounter: kic_refine_r2 trials= 388; accepts= 0.3144; energy_drop/trial= -0.00802 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -1.48874 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 102.754 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.5 -274.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.51377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.53339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.51492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1789 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.68 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19469 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.8 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32876 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.83 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1370 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1404052 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.045 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.045 -288.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.43 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8343 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.367 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.872 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1383 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1451104 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.841 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.841 -290.614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.5691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.468 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1418 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1546192 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.5 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.5 -292.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58165 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.92 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.48 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.61488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.5307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.325 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.206 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.266 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1663 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2118660 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.266 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.266 -295.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.52 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.43 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.54 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.415 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.6 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1427 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1567796 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.6 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.6 -295.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.6 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1330 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1438872 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.012 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.012 -295.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.0667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.99326 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.98297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1678 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2203284 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.583 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.583 -295.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -295.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.87 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.358 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1415 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1534648 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.615 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.615 -295.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26781 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1424 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1558808 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.86 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.86 -295.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.661 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.636 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1424 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1546848 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.505 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.505 -295.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.54 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.508 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1791 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2413464 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.347 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.347 -295.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1820 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2536376 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.881 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.881 -297.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1795 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2453688 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.805 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.805 -297.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1791 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2460844 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.704 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.704 -297.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -297.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.957 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.009 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1735 rotamers at 55 positions. core.pack.pack_rotamers: IG: 2437328 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.009 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.009 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.313 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.642 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1416 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1621224 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.468 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.468 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40481 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.878 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1521 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1806744 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.878 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.878 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1456 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1664884 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.887 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.887 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1471 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1672044 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.254 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.254 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.117 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35129 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1504 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1765492 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.788 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.788 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.574 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39343 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.749 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.073 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1583 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1837312 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.107 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.107 -299.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.107 protocols.moves.TrialCounter: kic_refine_r1 trials= 373; accepts= 0.3646; energy_drop/trial= -0.04531 protocols.moves.TrialCounter: kic_refine_r2 trials= 363; accepts= 0.3774; energy_drop/trial= 0.00886 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -1.54949 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -124.078 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 8 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1496 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1815560 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -274.613 -274.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -274.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.723938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -273.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.51989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.37037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.38751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.53991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.54158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.51735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.52252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.13658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.02165 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1425 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1734696 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.431 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.431 -294.431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.99854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.604 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96367 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.06011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.03103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.0103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.04252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.902 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1415 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1672520 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.902 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.902 -294.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.0183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.06699 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.34447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.34147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.36496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1428 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1785904 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.027 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.027 -296.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.37224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.52 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.34622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.34628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.36676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.302 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1381 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1548304 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.707 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.707 -296.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.34907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.36964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.228 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.34129 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.11 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.93 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1380 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1637968 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.081 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.081 -297.11 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.34691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1378 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1568036 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.626 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.626 -297.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.35186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.37308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.4547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.817 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1353 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1478104 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.817 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.817 -297.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -297.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.25933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.3336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.32049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.358 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.861 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1426 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1767488 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.861 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.861 -299.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.32046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.3173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30262 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.3222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.324 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1396 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1660420 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.339 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.339 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.43316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.44769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.45284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.43098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.128 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1449 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1864696 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.128 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.128 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.87 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.44048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.45327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.45466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.43 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1443 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1862180 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.263 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.263 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.39294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.71 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29159 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.36556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.37614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.35249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.996 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1441 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1821692 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.996 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.996 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.2572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.25695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.36542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.35885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.408 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1426 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1748152 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.408 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.408 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.43989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.876 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.44693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.3948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.58 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.37456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.99 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1410 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1667868 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.461 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.461 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.30878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1426 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1776924 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.753 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.753 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.30181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.30613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.618 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1418 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1751712 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.619 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.619 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.30682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.2737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.4082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.3921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.139 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1419 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1729832 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.139 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.139 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.29 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40469 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.38145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.39345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.39311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.067 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1431 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1768172 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.067 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.067 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.39782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.37008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.276 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1432 rotamers at 55 positions. core.pack.pack_rotamers: IG: 1769704 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.276 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.276 -299.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.32996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.32464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.32935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.3209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.15 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.44163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1