core.init: Mini-Rosetta version 52530 from https://svn.rosettacommons.org/source/trunk/rosetta/rosetta_source
core.init: command: condor_exec.exe -seed_offset 37 -database /home/rosie/rosie/rosie.back/data/antibody/rosetta_database -s FR_0001.pdb -scorefile score.sf -multiple_processes_writing_to_one_directory -ex1 -ex2 -antibody::remodel perturb_kic -antibody::snugfit true -antibody::refine refine_kic -antibody::cter_insert false -antibody::flank_residue_min true -antibody::h3_filter true -antibody::h3_filter_tolerance 20 -antibody::h3_no_stem_graft true -nstruct 50
core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-475805645 seed_offset=37 real_seed=-475805608
core.init.random: RandomGenerator:init: Normal mode, seed=-475805608 RG_type=mt19937
protocols.antibody2.AntibodyModelerProtocol: Setting Up defaults..........
protocols.antibody2.AntibodyModelerProtocol: Start Reading and Setting Options ...
protocols.antibody2.AntibodyModelerProtocol: Finish Reading and Setting Options !!!
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN6_mem_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN10_mem_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/memcbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/mem_pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
protocols.antibody2: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2: ///
protocols.antibody2: ///                     Rosetta 3 Antibody Modeler                           ///
protocols.antibody2: ///                                                                          ///
protocols.antibody2: ///  camelid              : 0
protocols.antibody2: ///
protocols.antibody2: /// ******  model_h3  :  1
protocols.antibody2: ///         h3_perturb_type     = 'perturb_kic'
protocols.antibody2: ///         cter_insert         = 0
protocols.antibody2: ///         h3_filter           = 1
protocols.antibody2: ///
protocols.antibody2: /// ******  snugfit   :  1
protocols.antibody2: ///         LH_repulsive_ramp   = 1
protocols.antibody2: ///
protocols.antibody2: /// ******  refine_h3 :  1
protocols.antibody2: ///         h3_refine_type      = 'refine_kic'
protocols.antibody2: ///         h3_filter           = 1
protocols.antibody2: ///         h3_filter_tolerance = 20
protocols.antibody2: ///
protocols.antibody2: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2: 
protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 1
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 2
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 3
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 4
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 5
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 6
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 7
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 8
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 9
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 10
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 11
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 12
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 13
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 14
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 15
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 16
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 17
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 18
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 19
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 20
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 21
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 22
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 23
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 24
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 25
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 26
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 27
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 28
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 29
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 30
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 31
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 32
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 33
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 34
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 35
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 36
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 37
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 38
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 39
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 40
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 41
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 42
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 43
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 44
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 45
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 46
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 47
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 48
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 49
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 50
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... 
protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: filling pose from PDB FR_0001.pdb
core.chemical.ResidueTypeSet: Finished initializing fa_standard residue type set.  Created 6352 residue types
core.conformation.Conformation: Found disulfide between residues 132 206
core.conformation.Conformation: current variant for 132 CYS
core.conformation.Conformation: current variant for 206 CYS
core.conformation.Conformation: current variant for 132 CYD
core.conformation.Conformation: current variant for 206 CYD
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.AntibodyModelerProtocol: AAAAAAAA     cst_weight: 0
protocols.antibody2.AntibodyModelerProtocol: Danger Will Robinson! Native is an impostor!
protocols.antibody2.AntibodyModelerProtocol:    'native_pose' is just a copy of the 'input_pose'    
protocols.antibody2.AntibodyModelerProtocol:     since you didn't sepcifiy the native pdb name
antibody2.AntibodyInfo: Successfully finished the CDR defintion
antibody2.AntibodyInfo: AC Detecting Regular CDR H3 Stem Type
antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: KINKED
antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: Kink: 1 Extended: 0
protocols.antibody2.AntibodyModelerProtocol: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2.AntibodyModelerProtocol: ///                          Rosetta Antibody Info                           ///
protocols.antibody2.AntibodyModelerProtocol: ///                                                                          ///
protocols.antibody2.AntibodyModelerProtocol: ///             Antibody Type:  Regular Antibody
protocols.antibody2.AntibodyModelerProtocol: /// Predict H3 Cterminus Base:  KINKED
protocols.antibody2.AntibodyModelerProtocol: ///                                                                          
protocols.antibody2.AntibodyModelerProtocol: /// H1 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  10
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  GYTFTNYGMN
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 136 145 141 0 0
protocols.antibody2.AntibodyModelerProtocol: /// H2 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  17
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  WINTYTGEPTYADDFKE
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 160 176 168 0 0
protocols.antibody2.AntibodyModelerProtocol: /// H3 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  14
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  DYYGSTYPYYAMDY
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 209 222 210 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L1 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  12
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  RASSSVSSSYLH
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 24 35 30 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L2 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  7
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  STSNLAS
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 51 57 54 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L3 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  9
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  QQYSGYPYT
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 90 98 94 0 0
protocols.antibody2.AntibodyModelerProtocol: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2.AntibodyModelerProtocol: 
protocols.antibody2.H3CterInsert: Reading CDR H3 C-ter Fragments
protocols.antibody2.H3CterInsert: LOOP 209 222 210 0 0
protocols.antibody2.H3CterInsert: cdr_h3_size=14
protocols.antibody2.H3CterInsert: aa_1name.size()=18
protocols.antibody2.H3CterInsert: ARDYYGSTYPYYAMDYWG
protocols.antibody2.H3CterInsert: Finished reading CDR H3 C-ter Fragments
protocols.antibody2.ModelCDRH3: Applying CDR H3 modeler
antibody2.AntibodyUtil: Utility: Setting up simple one loop fold tree
antibody2.AntibodyUtil: Utility: Finished setting up simple one loop fold tree
core.chemical.ResidueTypeSet: Finished initializing centroid residue type set.  Created 1980 residue types
core.conformation.Conformation: Found disulfide between residues 22 96
core.conformation.Conformation: current variant for 22 CYS
core.conformation.Conformation: current variant for 96 CYS
core.conformation.Conformation: current variant for 22 CYD
core.conformation.Conformation: current variant for 96 CYD
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: ALL_LOOPS:LOOP  begin  end  cut  skip_rate  extended
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: SELECTEDLOOPS:LOOP  begin  end  cut  skip_rate  extended
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: 
protocols.loops.loops_main: Pose fold tree FOLD_TREE  EDGE 1 207 -1  EDGE 207 210 -1  EDGE 207 224 1  EDGE 224 211 -1  EDGE 224 232 -1 
protocols.loops.loops_main: 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Setting extended torsions: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop attempt: 0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: perturb_one_loop_with_KIC: 209 14
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel init temp: 2
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel final temp: 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: kinematic initial perturb with start_res: 209  middle res: 215  end_res: 222
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd before initial kinematic perturbation:0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Attempting loop building: 0 ... 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: initial kinematic perturbation complete
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd after initial kinematic perturbation:8.04455
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -56.1158 -56.1158
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7457
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.26948
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.12257
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.94914
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.97519
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.0121
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.26252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.26686
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.6954
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.69328
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88873
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88183
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78066
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77712
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.10771
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.09121
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.09546
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.10304
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52857
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.54828
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.54654
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.56549
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.6356
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.63855
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.9537
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.95307
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.38395
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41163
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01892
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4585
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45812
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46476
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41393
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.12519
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21201
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.20407
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25079
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25915
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.22734
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04565
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92894
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.96496
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.14736
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.15186
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.13925
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.13444
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.13335
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.1319
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.11838
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88837
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56407
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.555
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58699
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7743
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78091
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77797
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.80299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78647
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.21546
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22004
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23767
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23805
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28075
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28357
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28421
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28481
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28977
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.29271
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.26784
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22807
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.31374
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.54377
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49499
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49943
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.54189
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.5064
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.50402
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.51978
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52363
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52659
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52619
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52008
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52327
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.51601
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.52302
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.41174
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.43428
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.42999
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06977
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06879
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08158
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.90801
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.90835
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.90931
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.29263
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.34393
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.69386
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.69067
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7235
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71131
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70471
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7052
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67215
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66241
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2111
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.18511
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22405
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23443
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.24263
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71723
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72582
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.73294
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72425
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.24864
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33984
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.15117
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71741
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70472
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.12447
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.14753
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.14765
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.20815
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01019
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.06484
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.0788
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.07735
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72594
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70922
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70642
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71617
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72063
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70151
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63132
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.95427
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.97422
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92047
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.91811
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92898
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45484
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.36048
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.35459
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.32712
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.36286
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.36238
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70866
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78179
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.61608
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.00643
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.00296
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01647
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09637
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10284
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71645
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7319
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81405
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82202
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81657
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46682
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50847
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65148
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64994
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65394
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58182
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31354
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31486
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16045
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.14867
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4198
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96111
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96413
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96338
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9578
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.95172
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.94622
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.94004
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.93947
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.94735
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.99471
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85785
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86707
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8503
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85335
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84547
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80511
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4713
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.46422
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.46167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.45179
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.47892
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48267
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93382
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.99212
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04013
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01405
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01811
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01702
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03654
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03733
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.21459
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20604
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.1125
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09423
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.07732
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86839
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.87301
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.83333
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82883
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.91149
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.93249
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88607
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89043
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90292
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90168
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90275
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82032
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80416
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82427
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8205
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81467
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80778
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81526
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80533
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80578
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80874
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80806
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81846
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80816
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81065
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.74652
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80162
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78914
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79069
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76436
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70485
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.70731
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82631
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90363
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89947
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.92256
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9162
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.91477
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.87049
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.87677
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.90985
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.90162
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95498
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95163
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95108
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.9796
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.97942
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.94149
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93853
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.92023
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.71034
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.71053
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.7435
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.74802
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81193
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81114
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.80167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81499
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.20133
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22164
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22211
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.24423
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.24476
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22669
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22498
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.28245
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.27948
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.27785
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.2878
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.30702
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55887
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55803
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55483
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56071
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55971
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32427
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31578
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52502
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.48976
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50563
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.82889
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64623
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65112
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85088
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.8568
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85823
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67736
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6785
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67977
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.66918
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68906
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.90159
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.89716
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.92575
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.92769
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.56454
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.256
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25794
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.20621
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.20676
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.1849
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.59677
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.59288
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.58796
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.58867
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.59126
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.59164
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.58175
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.56242
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.58304
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.58864
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.55383
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.48477
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.53091
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42786
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.41125
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.41463
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.40507
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.40512
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38316
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38661
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38712
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38002
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38622
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.38262
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.76569
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.73548
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.75677
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.71619
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.71874
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.73211
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.45397
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.46006
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.371
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.31231
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.5304
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.52797
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.75011
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.74823
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.76959
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77012
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77042
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77006
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.78511
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.8068
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.79195
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.79923
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.78358
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.78567
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.79232
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.85514
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.85455
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77468
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77303
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.77675
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.37609
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.34098
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.34579
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.3456
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.34108
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.34568
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.35025
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.49998
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.48116
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.48142
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.47387
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.47648
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.52526
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.52707
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.54262
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.79449
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.84898
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.80638
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.81534
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.83204
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.81345
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.798
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.78858
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.76239
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.75588
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.79647
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81174
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77428
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79636
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79757
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.75997
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.75192
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78244
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81768
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81556
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80238
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80465
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80983
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.83955
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82774
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90431
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.91105
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.91687
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.92345
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81561
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81337
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80833
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80365
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81203
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80879
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80881
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81378
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.81456
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8296
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82668
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82334
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8244
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8267
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.83503
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84651
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84902
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84732
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84804
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84871
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85783
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62886
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62912
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.62918
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.6275
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.41857
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3866
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37569
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37582
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37455
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37534
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37284
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37387
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4043
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4141
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40985
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4251
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42464
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40677
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.41275
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86533
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.87264
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.87701
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.88129
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.76292
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.75034
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.7563
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.75399
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.91291
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.67863
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.68784
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.53202
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.44647
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.42737
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.40878
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.40174
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.40145
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.39372
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.39338
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.37843
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.3824
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.38876
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.37527
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.37167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.34701
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.34112
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.35551
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.31693
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.31759
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.32698
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.26538
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.23071
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.23756
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.25904
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22651
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.36571
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.37959
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.36683
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.36692
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.34336
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.35701
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.45064
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.45395
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.46264
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.7745
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.80074
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.79754
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.79659
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.79463
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.71489
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.61093
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.57146
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.64213
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.65918
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.64235
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.6745
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.68177
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.68014
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.66984
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.8151
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.8031
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.72839
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.73265
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.9409
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.89469
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.25767
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.19315
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.1927
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.19217
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.21668
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.03412
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.03393
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02259
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02258
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.04003
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.98576
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.79356
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.81692
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.82294
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.85151
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8625
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86438
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86548
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86338
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7633
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.47296
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62912
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62116
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.613
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62526
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67804
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67817
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62097
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62047
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61352
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61478
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.48101
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.49318
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46729
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: result of loop closure:0 success, 3 failure 0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Loopstat:   209  222  209  222   14  time 145.0    0  time   0.0  -85.179   ext 
protocols.antibody2.ModelCDRH3: Finished Modeling Centroid CDR H3 loop
protocols.antibody2.ModelCDRH3: Finished applying CDR H3 modeler
protocols::checkpoint: Deleting checkpoints of LoopMover
protocols.antibody2.CDRsMinPackMin: FOLD_TREE  EDGE 1 23 -1  EDGE 23 36 1  EDGE 23 30 -1  EDGE 36 31 -1  EDGE 36 50 -1  EDGE 50 58 2  EDGE 50 54 -1  EDGE 58 55 -1  EDGE 58 89 -1  EDGE 89 99 3  EDGE 89 94 -1  EDGE 99 95 -1  EDGE 99 135 -1  EDGE 135 146 4  EDGE 135 141 -1  EDGE 146 142 -1  EDGE 146 159 -1  EDGE 159 177 5  EDGE 159 168 -1  EDGE 177 169 -1  EDGE 177 208 -1  EDGE 208 223 6  EDGE 208 210 -1  EDGE 223 211 -1  EDGE 223 232 -1 
protocols.antibody2.CDRsMinPackMin: 
protocols.loops.loops_main: Added cutpoint variants: RES: 30
protocols.loops.loops_main: Added cutpoint variants: RES: 54
protocols.loops.loops_main: Added cutpoint variants: RES: 94
protocols.loops.loops_main: Added cutpoint variants: RES: 141
protocols.loops.loops_main: Added cutpoint variants: RES: 168
protocols.loops.loops_main: Added cutpoint variants: RES: 210
basic.io.database: Database file opened: scoring/score_functions/disulfides/fa_SS_distance_score
core.pack.dunbrack: Dunbrack library took 0.05 seconds to load from binary
antibody2.AntibodyUtil: Utility: Setting Up Packer Task
antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 4439 rotamers at 148 positions.
core.pack.pack_rotamers: IG: 8330700 bytes
protocols.antibody2.RefineBetaBarrel:    start finalize_setup function ...
antibody2.AntibodyUtil: Utility: Setting Up Packer Task
antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.RefineBetaBarrel: FOLD_TREE  EDGE 1 23 -1  EDGE 23 30 -1  EDGE 23 36 2  EDGE 36 31 -1  EDGE 36 50 -1  EDGE 50 54 -1  EDGE 50 58 3  EDGE 58 55 -1  EDGE 58 87 -1  EDGE 87 89 -1  EDGE 89 94 -1  EDGE 87 134 1  EDGE 134 111 -1  EDGE 89 99 4  EDGE 99 95 -1  EDGE 99 110 -1  EDGE 134 135 -1  EDGE 135 141 -1  EDGE 135 146 5  EDGE 146 142 -1  EDGE 146 159 -1  EDGE 159 168 -1  EDGE 159 177 6  EDGE 177 169 -1  EDGE 177 208 -1  EDGE 208 210 -1  EDGE 208 223 7  EDGE 223 211 -1  EDGE 223 232 -1 
protocols.antibody2.RefineBetaBarrel: 
protocols.loops.loops_main: Added cutpoint variants: RES: 30
protocols.loops.loops_main: Added cutpoint variants: RES: 54
protocols.loops.loops_main: Added cutpoint variants: RES: 94
protocols.loops.loops_main: Added cutpoint variants: RES: 141
protocols.loops.loops_main: Added cutpoint variants: RES: 168
protocols.loops.loops_main: Added cutpoint variants: RES: 210
protocols.antibody2.RefineBetaBarrel:    finish finalize_setup function !!!
protocols.antibody2.LHRepulsiveRamp: start apply function ...
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 1:     rep_weight = 0.02
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.02) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 2:     rep_weight = 0.10284
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.10284) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 3:     rep_weight = 0.18568
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp: finish apply function !!!
protocols.antibody2.RefineBetaBarrel:    finish repulsive ramping !
protocols.docking.DockMCMProtocol: in DockMCMProtocol.apply
protocols.docking.DockMCMProtocol: Using the DockingTaskFactory.
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 5                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1326 rotamers at 43 positions.
core.pack.pack_rotamers: IG: 1451336 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1319 rotamers at 42 positions.
core.pack.pack_rotamers: IG: 1485060 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1028 rotamers at 40 positions.
core.pack.pack_rotamers: IG: 1171048 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1023 rotamers at 38 positions.
core.pack.pack_rotamers: IG: 1102368 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1023 rotamers at 38 positions.
core.pack.pack_rotamers: IG: 1102368 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1047 rotamers at 38 positions.
core.pack.pack_rotamers: IG: 1115220 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.RefineBetaBarrel:    finish L_H Docking !
protocols.antibody2.RefineBetaBarrel: FINISH BETA BARREL REFINEMENT STEP !! 
antibody2.AntibodyUtil: Utility: Setting up simple fold tree
antibody2.AntibodyUtil: Utility: Finished setting up simple fold tree
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -202.613 -202.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -202.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -224.986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -252.844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.29517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -263.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -266.188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.17163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.10422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.27753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.53
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.89228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.86846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.85769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.36
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1584 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2143696 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.158
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.158 -290.459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.81024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.97252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.1917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.56462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.94055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.92566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.92884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.92093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.91785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1791 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2774660 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.711
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.711 -294.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.04262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.05742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.88054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.86934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.86475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1757 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2638540 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.498
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.498 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.8941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.84853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.86255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.83
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.85759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.88995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.88384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.89167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.91207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.95306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.245
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.96919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.95472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.05
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1797 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2785584 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.05
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.05 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.05
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.09023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.02977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.542
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.03672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.04284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.03077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.05809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.04725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1769 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2672268 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.9
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.9 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.01904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.03623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.629
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1787 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2738640 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.629
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.629 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69573
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.94
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.47
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.51
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.88034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.79365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.75934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1728 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2401092 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.536
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.536 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.06102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.03729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.04797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.752
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1782 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2725984 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.752
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.752 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.94262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.233
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1767 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2648092 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.234
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.234 -295.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.04087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.03446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.01651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.868
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.6
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1743 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2681952 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.827
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.827 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.88687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.98
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.94237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.90574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.90972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.92564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.90318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1739 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2664704 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.987
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.987 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.69586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.7435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.16
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7398
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79429
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.86097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1718 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2614072 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.85
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.85 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.85
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.8415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.79219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.49
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.72651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.98578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96878
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.94
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.605
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1693 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2273184 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.605
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.605 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.794
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.94277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.04081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.86004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.078
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1664 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2186212 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.078
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.078 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.594
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1784 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2710468 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.594
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.594 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.97985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.76225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.75291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.738
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1701 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2491988 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.739
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.739 -295.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.72282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.7747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.78402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.80808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.80239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.75811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.619
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1745 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2689364 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.622
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.622 -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.75668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.77035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.76566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.77926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.48
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.78966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.83199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.175
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1784 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2666564 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.175
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.175 -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.82866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.82453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.82371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1736 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2606304 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.887
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.887 -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.66129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.61849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.62711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.077
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1743 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2660576 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.077
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.077 -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.67758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.61587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.61046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.53224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.52086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.50609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1709 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2287408 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.426
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.426 -296.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.426
protocols.moves.TrialCounter:    kic_refine_r1 trials=    381;  accepts= 0.2966;  energy_drop/trial=  -0.14139
protocols.moves.TrialCounter:    kic_refine_r2 trials=    382;  accepts= 0.3770;  energy_drop/trial=  -0.08624
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.16624
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -158.49
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.735616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.15775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -272.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.08665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.01
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.60229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.60569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.7976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.79066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.79094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.78463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.77113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.76
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.76317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.17
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.73642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.658
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1504 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1938388 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.683
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.683 -292.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.76191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.61269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.64302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.65502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.8831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.84022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.923
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1515 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1973504 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.923
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.923 -293.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.83096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.83677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.84675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.8468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.87218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1508 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1941216 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.781
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.781 -294.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.99093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.85294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.83872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.41
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.8297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.82313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.08
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1460 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1775480 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.073
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.073 -294.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.83614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.8251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.95046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.466
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.95381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.88
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.01704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.03796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.04788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.61
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.14551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.1381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.72
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.384
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1514 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1960324 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.49
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.49 -294.845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.49
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.01531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.301
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.48
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.41
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46168
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.29
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1460 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1825472 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.354
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.354 -295.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46327
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.55304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.06
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.55419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.64989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.65602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83301
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1456 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1814764 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.001
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.001 -295.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -295.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.15
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.61953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.64773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.65898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.504
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1463 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1830004 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.504
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.504 -295.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.65736
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.466
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1476 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1890336 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.658
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.658 -295.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.55892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.42745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1533 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2071192 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.161
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.161 -295.974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.12
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.44
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1528 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2043744 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.184
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.184 -297.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.617
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1612 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2205180 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.692
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.692 -298.035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.66
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44646
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.625
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1605 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2177136 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.625
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.625 -298.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.791
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1612 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2203324 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.799
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.799 -299.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -299.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1569 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2180960 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.553
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.553 -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.42237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.42347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1504 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1951224 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.016
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.016 -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.46
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.453
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1499 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1940740 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.453
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.453 -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40067
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.952
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1503 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1947992 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.055
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.055 -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1495 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1932896 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.029
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.029 -299.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1511 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1981604 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.591
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.591 -299.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.51
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1559 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2163996 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.33
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.33 -299.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.33
protocols.moves.TrialCounter:    kic_refine_r1 trials=    386;  accepts= 0.3601;  energy_drop/trial=  -0.05237
protocols.moves.TrialCounter:    kic_refine_r2 trials=    381;  accepts= 0.3123;  energy_drop/trial=  -0.18990
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.22648
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -151.075
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.824258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.743582
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.680706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.702503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.757971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -216.279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.760958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.781022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -267.369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.2029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -267.45
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -266.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.067
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.69219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.71
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.70955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.70991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.286
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1667 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2073628 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.286
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.286 -290.601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.69116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.49
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.75212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.01
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.74613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.23
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.99
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.69232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.69893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.22
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1696 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2163032 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.22
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.22 -293.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.22
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.8432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.84051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.83916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.16896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.17975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1677 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2360424 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.08
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.08 -298.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.1186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.16866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.7
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.17046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.41
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1745 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2483716 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.415
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.415 -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19259
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.36363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.35502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.35643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.38073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.15258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.03092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.01457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.946
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.02
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1718 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2323140 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.124
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.124 -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1719 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2308304 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.437
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.437 -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.513
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.29
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1669 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2209240 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.657
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.657 -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -299.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.14417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.52
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.0955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.15683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.15628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.767
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1526 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2014120 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.767
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.767 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.16039
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.32
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.03672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.42
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94098
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.679
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1664 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2157608 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.679
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.679 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.15645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.14556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.14704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.1615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1770 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2419100 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.784
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.784 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.04392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.92
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.04117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.259
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.233
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1690 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2260760 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.233
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.233 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.15
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98513
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.97638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.93351
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.402
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1604 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2055860 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.402
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.402 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.93149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.93815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90466
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89039
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1605 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2051536 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.38
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.38 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.996
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.86534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.49
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.35
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.332
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1679 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2274092 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.664
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.664 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.42
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.966
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1807 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2476392 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.966
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.966 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1654 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2259356 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.538
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.538 -300.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.789
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1645 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2237740 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.789
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.789 -300.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1660 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2271504 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.145
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.248 -300.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09377
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.75274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.74481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.74825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1599 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2176612 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.719
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.719 -300.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.76846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.76941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76271
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.77149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.123
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1614 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2206736 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.374
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.374 -300.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.76475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.75425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.75629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.77815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.7356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.75886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1634 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2249680 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.899
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.899 -301.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.899
protocols.moves.TrialCounter:    kic_refine_r1 trials=    381;  accepts= 0.3333;  energy_drop/trial=  -0.04131
protocols.moves.TrialCounter:    kic_refine_r2 trials=    367;  accepts= 0.3379;  energy_drop/trial=  -0.21877
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 0.9545;  energy_drop/trial=  -1.26432
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -170.917
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -207.085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -208.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -210.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -215.208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -271.527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.45
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.502
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1455 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1806444 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.502
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.502 -285.502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.62
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.13816
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.2714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.23202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.284
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1436 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1685692 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.284
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.284 -286.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.17
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.4293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.54852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.44518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.71051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.67068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.876
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.923
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1444 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1735124 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.923
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.923 -290.876
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.63584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.84
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.87
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.549
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1526 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1849256 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.69
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.69 -291.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.46
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.863
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1533 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1882568 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.864
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.864 -291.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40121
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.19
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1478 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1805016 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.281
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.281 -291.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1529 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1949316 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.09
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.09 -293.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -293.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.033
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1525 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1895296 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.435
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.435 -293.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23479
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1527 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1899604 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.589
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.589 -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30542
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.23
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.935
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.834
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1489 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1874340 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.834
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.834 -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.321
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1521 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1866808 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.686
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.686 -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.71
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.909
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1529 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1869652 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.91
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.91 -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.91
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1577 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1943436 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.855
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.855 -294.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.522
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1490 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1830092 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.526
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.526 -295.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -295.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.524
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.44
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.365
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1445 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1689324 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.365
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.365 -296.44
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.02
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4039
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1478 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1841296 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.901
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.901 -296.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.727
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.43191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.42514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.067
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1499 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1898228 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.516
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.516 -298.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.206
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.335
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1432 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1701088 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.448
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.448 -298.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.39
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1505 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1882264 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.238
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.238 -298.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.55926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.5464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.888
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1509 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1823220 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.918
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.918 -298.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5389
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.033
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.51685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.49797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.256
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1523 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1828628 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.359
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.359 -299.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.359
protocols.moves.TrialCounter:    kic_refine_r1 trials=    382;  accepts= 0.3717;  energy_drop/trial=  -0.06944
protocols.moves.TrialCounter:    kic_refine_r2 trials=    375;  accepts= 0.3733;  energy_drop/trial=  -0.18435
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.24987
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -149.577
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.794011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -211.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.793994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.815881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.825224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -212.84
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -241.698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -246.701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -262.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.15211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -264.976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.39247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -267.099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.38733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -266.944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.58482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -269.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.61436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -268.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.59178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.59202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.53158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.54289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.55008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -269.492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.54897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -266.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.10324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.07598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.14594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.14068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.163
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1457 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1855056 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.163
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.163 -288.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.27515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.29572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.28898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.28985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.2484
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.25961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.26776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.30089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.27771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.33592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.31457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.38
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.31051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.19224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.18197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.87252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.88541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.90347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.80781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1755 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2822212 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.54
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.54 -292.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.75001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.74318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.17831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.17957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.16194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.93
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.58071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.57009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.53623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.54154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.54062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.62071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1656 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2467180 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.198
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.198 -294.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.6368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.62992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.17
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.61886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.389
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.56569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.56346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.57158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.582
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.54886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.54434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.90099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.123
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1520 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2060204 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.09
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.09 -294.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.90171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.55036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.55399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.62563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.61426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.42126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.43137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.64227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.47
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.64246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.65462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.65159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.62983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.541
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1580 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2183160 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.541
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.541 -298.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.70077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.70787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.177
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.70517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.70609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.71983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.75861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.86483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.86035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.88721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.87923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.88814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.86007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1590 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2206384 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.174
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.174 -298.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.86116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.84476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.84516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.85823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.85329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.86134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.8364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1591 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2239144 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.151
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.151 -298.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -298.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.59891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.59581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.59273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.59145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.59607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.59469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.59921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.7041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.69054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.254
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1593 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2235900 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.941
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.941 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.93
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.66898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.67346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.69122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.68801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.69389
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.68333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.66561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.99
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.66416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.66403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.66435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.84108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.85301
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.8498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.85058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1434 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1797520 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.643
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.643 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.9935
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.05117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.06092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.91212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.85298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.84464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.90467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.87234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.85977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.86105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1482 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1927276 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.867
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.867 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.86281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.92
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.85567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.85932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.75964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.75846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1477 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1923792 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.14
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.14 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.27
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.84315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.84396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.8486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.85524
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.85131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.44
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1474 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1903660 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.44
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.44 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.44
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.83753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.7926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.79495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.64
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.79654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.80651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.80675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1481 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1936444 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.589
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.589 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.81464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.381
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.71283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.70059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.71684
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.75809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.794
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.77758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.78788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.78977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1489 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1965488 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.415
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.415 -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.70687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.033
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.80273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.79919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.78614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.79494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.79084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.7975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1599 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2246364 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.929
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.929 -300.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.90378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.90922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.89491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.89042
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.88524
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.88386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.88421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.89191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1682 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2572980 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.118
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.118 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.89435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.77817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.77495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.76703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1590 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2240496 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.964
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.964 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.75246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.72038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.584
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1634 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2384364 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.274
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.274 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.72609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.83
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1434 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1785264 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.577
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.577 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.74182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.7417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.68262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1583 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2178212 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.699
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.699 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.45
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.6852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1580 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2168372 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.231
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.231 -301.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.231
protocols.moves.TrialCounter:    kic_refine_r1 trials=    371;  accepts= 0.3450;  energy_drop/trial=  -0.06647
protocols.moves.TrialCounter:    kic_refine_r2 trials=    360;  accepts= 0.3389;  energy_drop/trial=  -0.18862
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.24924
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 161.046
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.65191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -214.234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.651362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.664061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.38654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.71603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.52128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.1378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.45
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.66
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.61
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.19865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.1857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.20395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.54122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.53042
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.597
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1443 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1740884 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.665
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.665 -291.665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.53679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.46964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.17154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.17315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1455 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1782520 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.505
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.505 -293.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.18715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.1693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91952
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.246
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1451 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1772040 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.246
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.246 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.61
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.05383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.71
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.98306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97398
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1456 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1787808 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.862
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.862 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.99022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.98302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.03801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.0613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.36045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.715
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1405 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1631888 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.737
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.737 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.737
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.6118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.36639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.3605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.54587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1529 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1783720 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.267
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.267 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.63311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.63467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.64911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.60106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.59639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.61661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1576 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1953468 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.593
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.593 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.1721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.14119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.93115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92513
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87377
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.93235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1470 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1810336 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.131
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.131 -294.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83573
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.81
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.85246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.8687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.86753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.67722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.166
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1444 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1758832 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.166
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.166 -296.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1446 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1771012 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.559
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.559 -296.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.64647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.48205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.65522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.737
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.66514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1447 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1762460 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.214
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.214 -296.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.737
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.878
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.011
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1447 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1772216 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.011
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.011 -296.401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.429
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73466
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1442 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1750684 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.13
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.13 -296.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.13
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.6202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.64571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.99503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.06451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.06112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.06906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.04848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82456
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.147
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1440 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1740952 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.24
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.24 -296.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.24
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -296.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.65755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.66957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1445 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1777080 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.798
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.798 -299.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.02533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.946
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.03203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.95469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.93877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.94677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.876
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.95944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1440 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1756896 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.865
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.865 -299.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.09785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.0981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.09659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.10291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.10419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.10351
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.10748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07484
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.82
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1443 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1758904 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.971
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.971 -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.07438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.07197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.06928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.09543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.10385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.10795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.10827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.10926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.08976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1443 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1763284 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.76
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.76 -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.76
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.08514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.07372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.99021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.98913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.98831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.99014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.67
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.94768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1485 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1829676 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.383
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.383 -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1463 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1781836 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.965
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.965 -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.997
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.895
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1472 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1796948 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.895
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.895 -300.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.895
protocols.moves.TrialCounter:    kic_refine_r1 trials=    381;  accepts= 0.3753;  energy_drop/trial=   0.02356
protocols.moves.TrialCounter:    kic_refine_r2 trials=    382;  accepts= 0.3455;  energy_drop/trial=  -0.25368
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.41762
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -159.728
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 7
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.12698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -208.006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.50981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.47531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.71247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.9126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.90257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.70144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.70889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.61654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.55989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.951
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.56675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.448
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1235 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1187236 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.448
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.448 -289.474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.67
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.691
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1560 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1902980 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.691
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.691 -290.961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85456
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.88407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.65531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.60958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1569 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2127868 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.146
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.146 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.23485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.17848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.24945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1536 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2039664 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.894
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.894 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.25172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.29006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.28796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.28781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.29097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.29743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.3008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.05
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.64445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.032
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1448 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1777804 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.032
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.032 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.29006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.25192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.02
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.31083
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.31142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.33155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.2875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.29392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.554
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1535 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1844120 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.554
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.554 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.32492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.3146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.8837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.29
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.87503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1585 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2003320 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.8
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.8 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.01
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.17833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.66
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.763
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1593 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2212232 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.763
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.763 -296.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.271
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.22992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.23167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.23742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.23688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.24795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.24676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1541 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2024256 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.325
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.325 -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.22204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.95
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.04125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.04502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.914
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1555 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2098908 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.004
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.004 -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.575
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1546 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2065740 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.575
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.575 -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.03324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.03553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.03485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.03441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.524
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95996
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1568 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2117968 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.681
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.825 -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.93869
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.94589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.93998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.17649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1540 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2065580 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.329
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.329 -296.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.57417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1460 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1834108 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.724
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.793 -298.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -298.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1466 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1857824 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.982
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.982 -298.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72507
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1468 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1849404 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -296.553
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.553 -298.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -296.553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77868
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.81
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.78
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.76951
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.301
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.265
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1461 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1832740 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.265
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.265 -298.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.82
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.68154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1464 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1841380 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.482
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.482 -298.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.68807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71868
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1458 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1822956 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.119
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.119 -298.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.216
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.465
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1460 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1831816 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.465
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.465 -298.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1458 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1828608 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.162
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.162 -298.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.162
protocols.moves.TrialCounter:    kic_refine_r1 trials=    387;  accepts= 0.2997;  energy_drop/trial=  -0.03882
protocols.moves.TrialCounter:    kic_refine_r2 trials=    383;  accepts= 0.3081;  energy_drop/trial=  -0.20516
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 0.9091;  energy_drop/trial=  -1.19802
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -156.495
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.97389
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.978394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -213.603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.29593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -217.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.71531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68507
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.462
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1723 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2261552 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.463
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.463 -296.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.784
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.154
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1614 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1906696 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.154
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.154 -296.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02177
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1521 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1810628 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.539
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -295.539 -296.867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -295.539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.99
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1545 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1945932 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.578
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.578 -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.29
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1679 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2177076 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.368
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.368 -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.736
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1550 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1955156 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.137
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.137 -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1552 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1963796 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.037
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.037 -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -300.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28466
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.81
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.50746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.32
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.48962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.369
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1514 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2102220 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.369
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.369 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.84
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.11
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.52
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1551 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1954300 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.752
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.752 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17429
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1550 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1960152 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.318
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.318 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.206
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.75665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.505
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1457 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1854716 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.639
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.639 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.95
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.074
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1463 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1895924 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.086
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.086 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.87795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.922
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1470 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1923556 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.923
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -297.923 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -297.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49039
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.44413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.4125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.47783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.996
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1548 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1969576 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.399
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.399 -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -301.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19946
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.45672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.083
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.13
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.54344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.46312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.45007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1552 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1963512 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.941
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.941 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44681
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.816
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.51563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.51555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1457 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1866688 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -300.722
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -300.722 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -300.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.952
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.27
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.93
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.796
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1544 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1931712 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.796
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.796 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1544 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1930096 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.129
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.129 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.259
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.56
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.364
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1479 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1931600 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -299.364
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -299.364 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -299.364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1549 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1957300 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.026
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.026 -301.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.477
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1541 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1942056 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.477
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.477 -301.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.477
protocols.moves.TrialCounter:    kic_refine_r1 trials=    382;  accepts= 0.3586;  energy_drop/trial=  -0.23342
protocols.moves.TrialCounter:    kic_refine_r2 trials=    385;  accepts= 0.3403;  energy_drop/trial=  -0.01992
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -1.21740
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -166.786
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1714 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2634272 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -200.509 -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -200.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -270.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.64
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.81409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.86011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.84778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.09677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.876
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.34
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.86147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1598 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2114648 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.325
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.325 -283.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.86188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.23712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.78
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.5005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.36019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.37962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.37334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.37483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.24608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.597
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.96464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.34
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.775
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1627 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 2087124 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.588
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.588 -292.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.98313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.9874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02804
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.8863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.8665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.87974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1552 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1775956 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.818
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.818 -293.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.98
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.14538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.067
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1449 rotamers at 55 positions.
core.pack.pack_rotamers: IG: 1786392 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.629
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.629 -293.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy a