core.init: Mini-Rosetta version 52530 from https://svn.rosettacommons.org/source/trunk/rosetta/rosetta_source core.init: command: condor_exec.exe -seed_offset 13 -database /home/rosie/rosie/rosie.back/data/antibody/rosetta_database -s FR_0001.pdb -scorefile score.sf -multiple_processes_writing_to_one_directory -ex1 -ex2 -antibody::remodel perturb_kic -antibody::snugfit true -antibody::refine refine_kic -antibody::cter_insert false -antibody::flank_residue_min true -antibody::h3_filter true -antibody::h3_filter_tolerance 20 -antibody::h3_no_stem_graft true -nstruct 50 core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-517999579 seed_offset=13 real_seed=-517999566 core.init.random: RandomGenerator:init: Normal mode, seed=-517999566 RG_type=mt19937 protocols.antibody2.AntibodyModelerProtocol: Setting Up defaults.......... protocols.antibody2.AntibodyModelerProtocol: Start Reading and Setting Options ... protocols.antibody2.AntibodyModelerProtocol: Finish Reading and Setting Options !!! core.scoring.etable: Starting energy table calculation core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6) core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6) core.scoring.etable: Finished calculating energy tables. basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBPoly1D.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBFadeIntervals.csv basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBEval.csv basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN6_mem_env_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN10_mem_env_log.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/memcbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/MembranePotential/mem_pair_log.txt basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4 protocols.antibody2: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2: /// protocols.antibody2: /// Rosetta 3 Antibody Modeler /// protocols.antibody2: /// /// protocols.antibody2: /// camelid : 0 protocols.antibody2: /// protocols.antibody2: /// ****** model_h3 : 1 protocols.antibody2: /// h3_perturb_type = 'perturb_kic' protocols.antibody2: /// cter_insert = 0 protocols.antibody2: /// h3_filter = 1 protocols.antibody2: /// protocols.antibody2: /// ****** snugfit : 1 protocols.antibody2: /// LH_repulsive_ramp = 1 protocols.antibody2: /// protocols.antibody2: /// ****** refine_h3 : 1 protocols.antibody2: /// h3_refine_type = 'refine_kic' protocols.antibody2: /// h3_filter = 1 protocols.antibody2: /// h3_filter_tolerance = 20 protocols.antibody2: /// protocols.antibody2: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2: protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 1 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 2 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 3 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 4 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 5 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 6 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 7 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 8 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 9 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 10 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 11 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 12 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 13 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 14 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 15 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 16 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 17 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 18 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 19 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 20 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 21 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 22 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 23 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 24 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 25 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 26 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 27 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 28 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 29 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 30 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 31 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 32 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 33 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 34 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 35 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 36 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 37 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 38 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 39 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 40 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 41 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 42 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 43 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 44 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 45 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 46 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 47 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 48 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 49 protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 50 protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job protocols.jd2.PDBJobInputter: filling pose from PDB FR_0001.pdb core.chemical.ResidueTypeSet: Finished initializing fa_standard residue type set. Created 6352 residue types core.conformation.Conformation: Found disulfide between residues 132 206 core.conformation.Conformation: current variant for 132 CYS core.conformation.Conformation: current variant for 206 CYS core.conformation.Conformation: current variant for 132 CYD core.conformation.Conformation: current variant for 206 CYD core.pack.task: Packer task: initialize from command line() protocols.antibody2.AntibodyModelerProtocol: AAAAAAAA cst_weight: 0 protocols.antibody2.AntibodyModelerProtocol: Danger Will Robinson! Native is an impostor! protocols.antibody2.AntibodyModelerProtocol: 'native_pose' is just a copy of the 'input_pose' protocols.antibody2.AntibodyModelerProtocol: since you didn't sepcifiy the native pdb name antibody2.AntibodyInfo: Successfully finished the CDR defintion antibody2.AntibodyInfo: AC Detecting Regular CDR H3 Stem Type antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: KINKED antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: Kink: 1 Extended: 0 protocols.antibody2.AntibodyModelerProtocol: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2.AntibodyModelerProtocol: /// Rosetta Antibody Info /// protocols.antibody2.AntibodyModelerProtocol: /// /// protocols.antibody2.AntibodyModelerProtocol: /// Antibody Type: Regular Antibody protocols.antibody2.AntibodyModelerProtocol: /// Predict H3 Cterminus Base: KINKED protocols.antibody2.AntibodyModelerProtocol: /// protocols.antibody2.AntibodyModelerProtocol: /// H1 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 10 protocols.antibody2.AntibodyModelerProtocol: /// sequence: GYTFTNYGMN protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 136 145 141 0 0 protocols.antibody2.AntibodyModelerProtocol: /// H2 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 17 protocols.antibody2.AntibodyModelerProtocol: /// sequence: WINTYTGEPTYADDFKE protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 160 176 168 0 0 protocols.antibody2.AntibodyModelerProtocol: /// H3 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 14 protocols.antibody2.AntibodyModelerProtocol: /// sequence: DYYGSTYPYYAMDY protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 209 222 210 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L1 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 12 protocols.antibody2.AntibodyModelerProtocol: /// sequence: RASSSVSSSYLH protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 24 35 30 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L2 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 7 protocols.antibody2.AntibodyModelerProtocol: /// sequence: STSNLAS protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 51 57 54 0 0 protocols.antibody2.AntibodyModelerProtocol: /// L3 info: protocols.antibody2.AntibodyModelerProtocol: /// length: 9 protocols.antibody2.AntibodyModelerProtocol: /// sequence: QQYSGYPYT protocols.antibody2.AntibodyModelerProtocol: /// loop_info: LOOP 90 98 94 0 0 protocols.antibody2.AntibodyModelerProtocol: //////////////////////////////////////////////////////////////////////////////// protocols.antibody2.AntibodyModelerProtocol: protocols.antibody2.H3CterInsert: Reading CDR H3 C-ter Fragments protocols.antibody2.H3CterInsert: LOOP 209 222 210 0 0 protocols.antibody2.H3CterInsert: cdr_h3_size=14 protocols.antibody2.H3CterInsert: aa_1name.size()=18 protocols.antibody2.H3CterInsert: ARDYYGSTYPYYAMDYWG protocols.antibody2.H3CterInsert: Finished reading CDR H3 C-ter Fragments protocols.antibody2.ModelCDRH3: Applying CDR H3 modeler antibody2.AntibodyUtil: Utility: Setting up simple one loop fold tree antibody2.AntibodyUtil: Utility: Finished setting up simple one loop fold tree core.chemical.ResidueTypeSet: Finished initializing centroid residue type set. Created 1980 residue types core.conformation.Conformation: Found disulfide between residues 22 96 core.conformation.Conformation: current variant for 22 CYS core.conformation.Conformation: current variant for 96 CYS core.conformation.Conformation: current variant for 22 CYD core.conformation.Conformation: current variant for 96 CYD core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: ALL_LOOPS:LOOP begin end cut skip_rate extended protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: SELECTEDLOOPS:LOOP begin end cut skip_rate extended protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: protocols.loops.loops_main: Pose fold tree FOLD_TREE EDGE 1 207 -1 EDGE 207 210 -1 EDGE 207 224 1 EDGE 224 211 -1 EDGE 224 232 -1 protocols.loops.loops_main: protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Setting extended torsions: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop: LOOP 209 222 210 0 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop attempt: 0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: perturb_one_loop_with_KIC: 209 14 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel init temp: 2 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel final temp: 1 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: kinematic initial perturb with start_res: 209 middle res: 215 end_res: 222 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd before initial kinematic perturbation:0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Attempting loop building: 0 ... protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: initial kinematic perturbation complete protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd after initial kinematic perturbation:7.44646 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -61.2322 -61.2322 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42987 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45528 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42568 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.44453 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.47325 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45901 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.18842 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.15526 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16839 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16842 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.55153 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.54675 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.54619 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.49774 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.49797 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.49704 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.49696 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42656 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40635 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.47691 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.51534 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.53156 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.53057 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.53076 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63486 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63208 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63973 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79709 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7959 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79355 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29867 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30296 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.27562 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30602 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30562 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30325 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30202 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30087 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33939 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.29156 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23599 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20056 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.19646 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.19611 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02904 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.05009 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04957 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02353 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84791 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84643 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.73178 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.50141 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.50921 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.51 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.51255 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48719 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48825 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48618 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4849 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48162 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4854 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.47299 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.47262 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.48881 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.43742 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80142 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.78965 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.79268 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.80672 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.90026 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.83804 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8073 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04063 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03461 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.99593 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.93682 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37785 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.36634 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.365 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.52281 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.51425 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.53503 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.55695 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.57155 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.43512 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4255 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.42116 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.63299 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.7246 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.73215 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77163 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.77081 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02079 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98507 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16905 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32456 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34231 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3395 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34409 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27649 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2801 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.0796 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46016 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45843 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2566 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6735 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66775 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66909 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66642 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.58608 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84808 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.69231 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.69082 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.67189 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.94489 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.9383 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.44324 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.37262 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3338 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.56072 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.55944 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.5612 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.566 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.57464 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.44028 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45316 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42741 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62486 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6291 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98331 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98021 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01264 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.00735 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84376 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85635 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.83312 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77161 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78942 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.75529 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76539 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77988 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.33968 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.56248 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.42284 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.36484 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02564 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98332 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.98078 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9612 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.92983 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.92115 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.75322 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76592 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71758 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.25554 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23963 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.23383 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.01954 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.0177 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.01851 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.99941 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.01295 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.94527 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.8893 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.94271 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.88953 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93666 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93152 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.94632 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93284 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.9324 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.93104 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95282 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.95113 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.86332 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88926 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.55404 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.5815 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.54219 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.53824 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.58189 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.56882 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.57781 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.56362 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.56586 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.59452 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.3702 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.65205 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.81405 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.39284 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.07148 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.04991 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.05746 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.11576 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.11167 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.01934 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.0213 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.02037 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.05829 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.05606 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.60265 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.60786 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52527 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52541 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52727 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51862 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51917 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51642 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51639 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52042 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.53928 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.54195 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51813 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41769 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.44407 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.44512 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.44559 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.43535 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.46418 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.5006 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.50365 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.85004 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.85299 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.94025 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.94699 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.94531 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.94463 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02394 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02412 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02412 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.02527 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.7714 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.75795 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.76825 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.77404 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.77302 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.49933 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.50026 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.50519 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.50688 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.49545 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52086 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22955 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.22815 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.23107 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.24656 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.24787 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.24866 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.45615 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.44661 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.46641 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.90715 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.90905 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.90327 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.89297 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.89389 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.90147 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 5.09888 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.90899 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.82552 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.85626 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.85757 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02118 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.01933 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10779 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.08956 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.67316 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22913 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.18705 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.1868 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.20193 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.17739 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.17632 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.17679 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.17747 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.21318 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.21908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27657 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89546 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.8796 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88162 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88072 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85463 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.84977 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85091 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85134 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85861 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.85836 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.86213 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10387 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10123 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.06979 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13183 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13343 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.16187 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13564 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13518 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.19203 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23192 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23988 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2847 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27409 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28298 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28062 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.26228 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36739 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3627 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36515 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36825 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.30969 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28505 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33591 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32946 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32912 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32402 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32459 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32947 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32231 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3046 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23411 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36184 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.35823 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.362 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3636 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34298 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41063 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37984 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.44651 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85768 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.86589 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.8947 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88632 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89305 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89187 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88908 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85353 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84865 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85199 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85308 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00163 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00681 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00149 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00117 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06681 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.0564 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05407 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05931 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04563 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04494 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05447 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.98825 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.98714 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01761 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05425 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05229 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05604 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.07362 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09101 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.07974 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05345 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05003 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.0448 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04856 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.0476 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89861 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89209 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89138 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88392 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87485 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84599 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.90274 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.903 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.9111 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.91057 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.91306 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01323 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.99435 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.12458 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.10678 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.10929 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.14193 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01318 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01931 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.01838 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70096 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05843 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.54541 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55044 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55041 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46443 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.47379 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4986 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50047 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60818 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58786 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.59072 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.59145 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33302 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33289 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3191 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31592 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27256 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00936 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.9818 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.98091 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.97708 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.97758 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.96926 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.94469 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.91087 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.9222 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92568 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92318 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.86699 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87004 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50535 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50338 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.54347 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.54117 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.48757 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.48987 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.49305 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.49706 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.49639 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50274 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50485 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50597 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51018 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.55226 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56381 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.57171 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.57515 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.58054 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.59781 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.59778 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72049 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7471 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92562 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93181 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.94309 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71586 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72684 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72749 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.79718 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78804 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78838 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78899 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.79077 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71918 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72682 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.69981 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.66406 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65667 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64318 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64225 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.53959 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.47378 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.44889 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.46105 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85063 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85413 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87444 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67235 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.66757 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67255 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67356 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.81695 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.81351 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.82264 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.73993 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76105 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76906 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.77152 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76883 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52219 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51224 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52347 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52129 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.53237 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.50984 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.53136 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.02077 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04096 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.96038 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.02969 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21274 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21366 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21399 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.17053 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.99805 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.98803 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05959 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09524 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08784 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08765 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08958 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08774 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.06124 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.06556 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.17252 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: result of loop closure:0 success, 3 failure 0 protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Loopstat: 209 222 209 222 14 time 166.0 0 time 0.0 -86.3502 ext protocols.antibody2.ModelCDRH3: Finished Modeling Centroid CDR H3 loop protocols.antibody2.ModelCDRH3: Finished applying CDR H3 modeler protocols::checkpoint: Deleting checkpoints of LoopMover protocols.antibody2.CDRsMinPackMin: FOLD_TREE EDGE 1 23 -1 EDGE 23 36 1 EDGE 23 30 -1 EDGE 36 31 -1 EDGE 36 50 -1 EDGE 50 58 2 EDGE 50 54 -1 EDGE 58 55 -1 EDGE 58 89 -1 EDGE 89 99 3 EDGE 89 94 -1 EDGE 99 95 -1 EDGE 99 135 -1 EDGE 135 146 4 EDGE 135 141 -1 EDGE 146 142 -1 EDGE 146 159 -1 EDGE 159 177 5 EDGE 159 168 -1 EDGE 177 169 -1 EDGE 177 208 -1 EDGE 208 223 6 EDGE 208 210 -1 EDGE 223 211 -1 EDGE 223 232 -1 protocols.antibody2.CDRsMinPackMin: protocols.loops.loops_main: Added cutpoint variants: RES: 30 protocols.loops.loops_main: Added cutpoint variants: RES: 54 protocols.loops.loops_main: Added cutpoint variants: RES: 94 protocols.loops.loops_main: Added cutpoint variants: RES: 141 protocols.loops.loops_main: Added cutpoint variants: RES: 168 protocols.loops.loops_main: Added cutpoint variants: RES: 210 basic.io.database: Database file opened: scoring/score_functions/disulfides/fa_SS_distance_score core.pack.dunbrack: Dunbrack library took 0.06 seconds to load from binary antibody2.AntibodyUtil: Utility: Setting Up Packer Task antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 4131 rotamers at 147 positions. core.pack.pack_rotamers: IG: 7088888 bytes protocols.antibody2.RefineBetaBarrel: start finalize_setup function ... antibody2.AntibodyUtil: Utility: Setting Up Packer Task antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task core.pack.task: Packer task: initialize from command line() protocols.antibody2.RefineBetaBarrel: FOLD_TREE EDGE 1 23 -1 EDGE 23 30 -1 EDGE 23 36 2 EDGE 36 31 -1 EDGE 36 37 -1 EDGE 37 50 -1 EDGE 50 54 -1 EDGE 37 206 1 EDGE 50 58 3 EDGE 58 55 -1 EDGE 58 89 -1 EDGE 89 94 -1 EDGE 206 177 -1 EDGE 206 208 -1 EDGE 208 210 -1 EDGE 89 99 4 EDGE 99 95 -1 EDGE 99 110 -1 EDGE 177 159 6 EDGE 159 146 -1 EDGE 159 168 -1 EDGE 177 169 -1 EDGE 208 223 7 EDGE 223 211 -1 EDGE 223 232 -1 EDGE 146 135 5 EDGE 135 111 -1 EDGE 135 141 -1 EDGE 146 142 -1 protocols.antibody2.RefineBetaBarrel: protocols.loops.loops_main: Added cutpoint variants: RES: 30 protocols.loops.loops_main: Added cutpoint variants: RES: 54 protocols.loops.loops_main: Added cutpoint variants: RES: 94 protocols.loops.loops_main: Added cutpoint variants: RES: 141 protocols.loops.loops_main: Added cutpoint variants: RES: 168 protocols.loops.loops_main: Added cutpoint variants: RES: 210 protocols.antibody2.RefineBetaBarrel: finish finalize_setup function !!! protocols.antibody2.LHRepulsiveRamp: start apply function ... protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 1: rep_weight = 0.02 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.02) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 2: rep_weight = 0.10284 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.10284) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: repulsive ramp cycle 3: rep_weight = 0.18568 protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 2 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 1 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 2 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 3 core.pack.task: Packer task: initialize from command line() protocols.antibody2.LHRepulsiveRamp: doing rb_mover_min_trial in the DockMCMCycle ... 4 protocols.antibody2.LHRepulsiveRamp: finish apply function !!! protocols.antibody2.RefineBetaBarrel: finish repulsive ramping ! protocols.docking.DockMCMProtocol: in DockMCMProtocol.apply protocols.docking.DockMCMProtocol: Using the DockingTaskFactory. protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// protocols.docking.DockMCMCycle: /// Dockable Jumps: 1 /// protocols.docking.DockMCMCycle: /// Translation: 0.1 /// protocols.docking.DockMCMCycle: /// Rotation: 5 /// protocols.docking.DockMCMCycle: /// Scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: /// Packing scorefunction: /// protocols.docking.DockMCMCycle: ScoreFunction::show(): weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1) energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT analytic_etable_evaluation: 0 EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51 EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615 protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score: protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75 protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false protocols.docking.DockMCMCycle: protocols.docking.DockMCMCycle: //////////////////////////////////////////////////////////////////////////////// core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1226 rotamers at 47 positions. core.pack.pack_rotamers: IG: 1228672 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1406 rotamers at 50 positions. core.pack.pack_rotamers: IG: 1648784 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1406 rotamers at 50 positions. core.pack.pack_rotamers: IG: 1648784 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1406 rotamers at 50 positions. core.pack.pack_rotamers: IG: 1648784 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1388 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1616748 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1388 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1616748 bytes core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() core.pack.task: Packer task: initialize from command line() protocols.antibody2.RefineBetaBarrel: finish L_H Docking ! protocols.antibody2.RefineBetaBarrel: FINISH BETA BARREL REFINEMENT STEP !! antibody2.AntibodyUtil: Utility: Setting up simple fold tree antibody2.AntibodyUtil: Utility: Finished setting up simple fold tree protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -296.186 -296.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -296.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.15308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.30893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.50079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.56251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.53883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.56549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.384 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.56516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.42331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.42296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.36639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.34524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.98 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.16475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.16289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.16577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.17226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.18594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.19833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.19936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1087 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1221132 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.156 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.156 -310.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.23287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.22927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.27514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.17711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.79 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.17752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.17143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.13719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.14264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.14077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.2214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.30805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.32519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.73 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.7 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1120 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1345972 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.596 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.596 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.2728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.68 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.30804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.2794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.31969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.33089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.32494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.13 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.33575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.33276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.3327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.32452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.262 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.40026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.39678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.38893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.38615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.707 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1026 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1031096 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.707 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.707 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.37089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.35716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.41872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.41034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.96051 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.16194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1070 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1149936 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.66 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.66 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.66 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.2022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.27461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.101 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.26226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.35926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.325 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.56744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.57634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.24716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.27271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.34096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.69 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 860 rotamers at 48 positions. core.pack.pack_rotamers: IG: 675116 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.764 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.764 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.36373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.35089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.16807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.31917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.5342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.63136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.048 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 810 rotamers at 48 positions. core.pack.pack_rotamers: IG: 679552 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.063 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.063 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.95178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.95638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.11713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.0336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.07152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.22521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.22349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.22953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.471 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1074 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1242008 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.471 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.471 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.16422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.16571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.17572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.18018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.17718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.17895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.22484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.24674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.12053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.11605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.14645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.14722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.1623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.16497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.694 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1089 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1229596 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.694 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.694 -312.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.15852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.15816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.16469 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.051 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.33902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.33914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 981 rotamers at 48 positions. core.pack.pack_rotamers: IG: 931940 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.272 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.272 -312.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.34224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.389 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.32 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.25141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.21 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1153 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1404600 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.212 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.212 -312.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.62 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20801 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.75 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.25894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.24105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.076 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 980 rotamers at 48 positions. core.pack.pack_rotamers: IG: 922900 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.076 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.076 -312.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.54 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.35409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.34199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30165 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31781 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.931 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1209 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1538852 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.931 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.931 -312.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.48663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.49575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.49446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.5451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.56692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1043 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1107452 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.31 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.31 -313.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.666 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1043 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1094412 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.666 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.666 -313.538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -313.538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03424 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1033 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1082000 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.88 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.88 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1032 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1089988 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.012 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.012 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10807 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.07564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1035 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1082856 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.654 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.654 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.472 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1060 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1165912 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.472 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.472 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.59 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.99 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1063 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1172704 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.99 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.99 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.99 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.863 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1072 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1215304 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.863 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.863 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.58 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.706 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1053 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1153048 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.706 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.706 -313.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.706 protocols.moves.TrialCounter: kic_refine_r1 trials= 361; accepts= 0.3961; energy_drop/trial= -0.02018 protocols.moves.TrialCounter: kic_refine_r2 trials= 373; accepts= 0.3780; energy_drop/trial= -0.00534 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -0.13318 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -178.899 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 2 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.764656 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.767365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.885034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.914414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.32373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.31236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.13684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.15 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.588 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1076 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1224068 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.588 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.588 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15006 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.98 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.20111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.488 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1090 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1241696 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.887 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.887 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1075 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1227048 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.988 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.988 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.48716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.57 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1052 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1160560 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.75 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.039 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53749 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.6 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.79888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.78045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.77655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.79891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.55842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.818 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1042 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1133764 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.861 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.818 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.54046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.5647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1136 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1413992 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.479 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.479 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62517 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.61 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.41158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.41323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.41516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1162 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1499888 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -297.69 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.172 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.18243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.18327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.20808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.0818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.03833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.341 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1241 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1722532 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.341 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.341 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18129 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.17294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.2483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.01694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.574 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.677 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1023 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1151568 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.677 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.677 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90564 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.88846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.732 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1079 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1259948 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.936 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.936 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1089 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1312584 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.225 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.225 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.117 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.449 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1132 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1456452 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.449 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.449 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.27957 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.27278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.28107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.23973 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24021 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.24538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1147 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1528676 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.81 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.81 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.81 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.24991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.24911 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.23108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.23889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.98 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.23404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.23078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.08 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.2269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.33 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.22751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1134 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1501328 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.449 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.449 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.01028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.01112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.16 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.03364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.69898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.766 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1227 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1665880 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.766 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.766 -309.307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.97 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.046 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1220 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1640924 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.046 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.046 -311.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.29 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1229 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1666028 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.762 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.762 -311.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.84 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.957 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.682 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1060 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1178176 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.702 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.702 -311.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.265 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1215 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1617828 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.265 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.265 -311.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.362 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.27003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.57 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1223 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1631664 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.372 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.372 -311.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5002 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.006 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1219 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1635316 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.85 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.85 -311.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.85 protocols.moves.TrialCounter: kic_refine_r1 trials= 386; accepts= 0.4093; energy_drop/trial= 0.01665 protocols.moves.TrialCounter: kic_refine_r2 trials= 373; accepts= 0.4531; energy_drop/trial= -0.04849 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.8636; energy_drop/trial= -0.22362 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -155.878 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.569 -293.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.260802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.75 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.786004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.801466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.20194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.18651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.26 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.567 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1041 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1155244 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.567 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.567 -306.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.604 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.35928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59019 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.769 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1017 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1148608 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.928 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.769 -306.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53396 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1039 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1148056 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -295.406 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.356 -308.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54006 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.09 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.77211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.84449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.84176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.84584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.8474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.26611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.29084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.28401 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1009 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1052528 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.734 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.734 -308.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.61 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.37676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.3553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.36899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.36744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.029 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1222 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1652756 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.027 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.027 -309.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.99031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.85 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.99336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.86826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.86922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.85569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.85913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.86015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1199 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1606128 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.689 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.689 -309.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.97195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.97255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.91366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.03625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.661 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.13565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.13515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 984 rotamers at 48 positions. core.pack.pack_rotamers: IG: 970608 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.422 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.422 -309.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -309.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.16644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.1606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.1115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.72 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94424 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.22 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.94283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1086 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1257692 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.985 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.985 -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.035 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.91672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.53405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56597 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.5672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.23 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.899 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1063 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1188316 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.899 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.899 -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.58721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.58151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59006 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.14 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.5514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.79 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40481 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.35536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.35571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1011 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1095408 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.991 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.991 -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1024 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1103128 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.46 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.46 -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67781 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.70584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.481 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.70873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.79217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.77 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1025 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1086068 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -304.77 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -304.77 -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -304.77 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.7967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.7327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.73359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.22 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3127 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.35613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31262 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.93 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.32 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1149 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1352508 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.32 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.32 -311.32 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.32 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24789 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.21 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1147 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1359088 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.539 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.539 -311.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -311.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.67 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1081 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1172148 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.03 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.03 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1925 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.68 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.655 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1085 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1179632 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.655 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.655 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.194 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.918 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1201 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1467504 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.918 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.918 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.53 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1171 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1429264 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.53 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.53 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.53 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1171 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1425224 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.961 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.961 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17406 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.89 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.17975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.871 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1151 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1385000 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.871 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.871 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.871 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1139 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1355252 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.235 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.235 -312.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.235 protocols.moves.TrialCounter: kic_refine_r1 trials= 369; accepts= 0.3821; energy_drop/trial= -0.01975 protocols.moves.TrialCounter: kic_refine_r2 trials= 380; accepts= 0.3763; energy_drop/trial= -0.02138 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9091; energy_drop/trial= -0.19178 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 164.404 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.563213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.314982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.467403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.691 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.95866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.79791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.956 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.79209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.80649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.79344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.75903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.65264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.90996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1014 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1014840 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.071 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.071 -308.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.28619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.28993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.33909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.65878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.46 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1068 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1198320 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.46 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.46 -309.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.65 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.116 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.49518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.751 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1056 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1182324 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.751 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.751 -311.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45287 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1265 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1754308 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.429 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.429 -312.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1263 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1770868 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.713 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.713 -312.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.565 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45892 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45325 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.38 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.82743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.92295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.27 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.87566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.578 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1082 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1193168 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.578 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.578 -312.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.85296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.83786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.83872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.83926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.81747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.82438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.82292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.776 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1061 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1135108 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.776 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.776 -312.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -312.633 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.71166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.70977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.71309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.72249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.71331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.338 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1275 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1760216 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.338 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.338 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.7156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.46 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59201 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.22 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56185 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.581 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1252 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1726768 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.082 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.581 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.6493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.78727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.79525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.80897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.096 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1253 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1730164 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.096 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.096 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.85635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.83408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.82998 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.388 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.109 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62198 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61326 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.498 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1243 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1695148 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.63 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.63 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46469 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.35891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.34641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1264 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1774260 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.046 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.046 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.49614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.98 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4439 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.84 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.965 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1254 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1716320 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.965 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.965 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.165 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.48341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.48299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1251 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1709220 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.754 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.219 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.55018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.65006 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.65545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.66081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.65901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64032 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.98 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.11 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.692 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1257 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1736944 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.137 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.137 -312.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.41 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.207 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.97 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.57464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58893 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.123 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1079 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1220408 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.123 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.123 -313.323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.399 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46597 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.428 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1236 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1663256 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.185 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.428 -313.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.595 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1250 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1715596 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.649 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.728 -313.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44336 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.452 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.1 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1232 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1652876 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -304.258 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.738 -313.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -314.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -314.002 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1243 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1682348 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -314.002 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -314.002 -314.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -314.002 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39781 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.933 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1256 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1728912 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.892 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.933 -314.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.933 protocols.moves.TrialCounter: kic_refine_r1 trials= 374; accepts= 0.4385; energy_drop/trial= 0.00757 protocols.moves.TrialCounter: kic_refine_r2 trials= 381; accepts= 0.4068; energy_drop/trial= -0.04906 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.7273; energy_drop/trial= -0.20205 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -162.368 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.569 -293.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.65417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.64934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.77127 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.79116 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1198 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1430076 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -262.68 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.488 -302.941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.65332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.65335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.65147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.70577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.70715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.716 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.55 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89487 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.24 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.61193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.55742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.56954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.56395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.116 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.56743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.5409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.20042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.28723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.49953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.65549 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.883 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1011 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1015588 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.979 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.979 -306.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.65263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.65419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.71579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.522 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1063 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1059140 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.522 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.522 -306.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.5636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.61294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.65411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.65603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.93793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8229 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.70275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1198 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1538760 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.778 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.778 -308.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.7075 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.70628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.71669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.71537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.71521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.72314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.71768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.7035 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.6714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.67093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.67356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.67726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.777 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1222 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1605340 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.777 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.777 -309.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.69646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.70094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.036 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.70164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.33609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.34851 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.35834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.56 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80201 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79269 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78348 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.337 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1257 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1756804 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.337 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.337 -311.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8656 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1270 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1792080 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.938 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.938 -311.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -311.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.658 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.704 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1203 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1555980 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.704 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.704 -311.364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.08 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.056 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.51 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.84 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.69 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1264 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1772080 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.35 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.35 -311.364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.35 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.384 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92908 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.93022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1275 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1809660 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.024 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.024 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.699 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.315 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.896 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1216 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1585708 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.896 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.896 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.8188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.979 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1291 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1859100 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.979 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.979 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.884 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.151 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1028 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1141492 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.126 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.126 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.75 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30012 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1032 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1193204 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.022 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.022 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1281 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1822668 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.239 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.239 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.44 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.699 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.456 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1243 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1670056 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.537 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.537 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1242 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1682592 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.264 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.264 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1572 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1588 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.23 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98887 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.387 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.881 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1208 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1560596 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.881 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.881 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.881 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70424 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.67687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70368 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1247 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1699124 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.199 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.199 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.5124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.647 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.21 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.591 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1088 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1225484 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.615 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.615 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58983 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1209 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1539016 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.091 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.091 -312.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.091 protocols.moves.TrialCounter: kic_refine_r1 trials= 371; accepts= 0.4043; energy_drop/trial= -0.00557 protocols.moves.TrialCounter: kic_refine_r2 trials= 350; accepts= 0.4086; energy_drop/trial= -0.01823 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9545; energy_drop/trial= -0.18685 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 165.671 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 6 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.312182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.281737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.14 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.292467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.271561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.298156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.72382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.73413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.661 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02958 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.87 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22251 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21111 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48732 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.6 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37664 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.17377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18171 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.18821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.135 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1038 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1228240 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.135 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.135 -307.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19501 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.38551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.38055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.801 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.29709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.31223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.30701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.3081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.52449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.53785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.54437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1055 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1260032 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.261 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.261 -307.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.52511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.52389 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52598 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66261 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.217 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.58069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.60812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.61482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.801 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80433 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.13 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.752 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1069 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1299840 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.78 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.78 -307.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.574 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.809 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.93 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18861 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1063 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1299680 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.724 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.724 -307.93 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16179 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.19 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.03 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97201 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.304 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.063 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1077 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1335280 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.072 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.072 -308.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.072 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.77 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.567 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1078 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1326352 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.567 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.567 -308.77 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.233 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10343 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10318 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.274 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1041 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1263480 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.255 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.255 -308.77 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -308.77 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.8548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.159 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1061 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1269924 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.134 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.134 -308.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8788 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.464 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.864 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94604 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.614 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1036 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1215096 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.548 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.548 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.925 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.541 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.298 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1062 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1278488 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.33 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -303.33 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -303.33 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.41189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.63085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.69561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.802 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.71289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.731 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1093 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1392484 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.731 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.731 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67127 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.235 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.207 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.816 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.44098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43508 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.4335 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.43654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.482 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.704 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1086 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1360204 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.704 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.704 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.828 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.027 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.65928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.64283 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.62117 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62282 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.8104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.632 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1046 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1282572 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -301.355 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -301.355 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -301.355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.06004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.04436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.319 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.7978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1063 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1317396 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.067 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.067 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -309.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.787 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12582 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13075 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14103 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.928 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1070 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1321496 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.719 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.719 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05875 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1070 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1305812 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.106 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.106 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.302 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15427 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.925 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.93986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.483 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1073 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1332432 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.483 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.483 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.201 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.53 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1076 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1340664 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.53 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.53 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.53 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.423 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95996 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.488 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97465 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.559 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.224 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1085 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1326020 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.224 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.224 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.149 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.57 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16493 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20589 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22924 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.995 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1074 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1316540 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.119 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.119 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86738 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.176 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86764 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.60544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59626 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.69543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.656 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1077 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1338228 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.656 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.656 -309.649 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.656 protocols.moves.TrialCounter: kic_refine_r1 trials= 394; accepts= 0.3858; energy_drop/trial= 0.02136 protocols.moves.TrialCounter: kic_refine_r2 trials= 398; accepts= 0.3794; energy_drop/trial= -0.02477 protocols.moves.TrialCounter: repack trials= 22; accepts= 1.0000; energy_drop/trial= -0.17043 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 173.672 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 7 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.346223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.353095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24714 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19846 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.27394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.281 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.28786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.29135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.28594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.57 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1105 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1271660 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.377 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.377 -309.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.23133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.49 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12607 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.38323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.41329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.677 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.557 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.259 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.76 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49578 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48661 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.49128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.48585 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.093 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1040 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1098808 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.093 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.093 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.093 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.5028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.728 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.24211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.26416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.20462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.21266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.23695 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.533 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.22898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.54854 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.343 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39459 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.42148 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.223 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.42741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.51717 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.988 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1012 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1061700 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -304.988 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -304.988 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -304.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.42808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43875 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.47108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.848 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.38894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.38441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39547 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39909 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.535 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.42995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1034 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1095396 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.226 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.226 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.226 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.42041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34845 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.46986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.61873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.71961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.377 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9516 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84753 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.36 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.123 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.14434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.19317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.12838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.407 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.078 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1036 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1093424 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.078 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.078 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.078 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.11369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.12706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.497 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.05932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.85 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.07829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.06696 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.306 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1013 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1079452 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.009 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.009 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.22301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.13173 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.14857 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.252 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.16414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.18523 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.15218 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51478 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.53349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.255 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.019 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.424 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11678 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23141 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.56 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1133 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1282700 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.721 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.721 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -309.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22856 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.812 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23346 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.23113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.24873 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.153 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.27853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.023 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.317 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.667 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.599 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.432 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1095 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1253176 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.432 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.432 -310.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01403 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00843 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.84 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.37 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.256 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1042 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1062084 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.363 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.363 -310.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20276 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20402 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.20115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.913 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21914 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20613 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.135 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1097 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1213972 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.822 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.143 -310.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.07443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06855 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.721 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.751 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.01 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00912 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.435 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.311 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05397 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.3 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.51 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1028 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1084544 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.51 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.51 -311.51 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.51 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99186 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.9947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.998 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00967 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.207 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.23 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.07525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09502 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08791 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09421 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1036 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1106876 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.882 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.882 -312.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.686 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.115 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.29 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10468 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1084 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1232820 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.073 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.073 -312.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.12202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.527 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01381 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.45 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.64 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.158 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13849 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.356 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13118 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.973 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1037 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1106256 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.354 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.354 -313.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -313.514 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13083 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12761 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.364 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1091 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1236764 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.364 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.364 -313.518 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1498 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1272 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.821 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13228 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.07 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15672 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.361 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97247 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.735 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1091 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1244208 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.767 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.767 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9715 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.927 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.931 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.085 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1047 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1126080 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.378 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.378 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.378 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97643 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97965 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.05 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97534 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.98234 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.13 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.164 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1070 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1192272 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.529 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.529 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.181 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05455 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.901 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.331 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1038 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1107044 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.421 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.963 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.963 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.394 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.228 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.485 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11727 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.206 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09232 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.833 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.745 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1070 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1200740 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.745 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.745 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09886 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10124 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.83 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.277 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11241 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10382 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10883 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1099 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1029 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1077332 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.17 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.17 -313.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.17 protocols.moves.TrialCounter: kic_refine_r1 trials= 374; accepts= 0.3610; energy_drop/trial= 0.00472 protocols.moves.TrialCounter: kic_refine_r2 trials= 378; accepts= 0.4206; energy_drop/trial= -0.03578 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9091; energy_drop/trial= -0.18133 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 140.113 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 8 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31617 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -296.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.25694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.28236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.27923 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.25214 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.38298 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.072 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.46902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.64966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6146 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.69552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.316 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72227 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.462 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1042 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1118856 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.266 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.266 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00133 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.75 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97573 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.813 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.25 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0044 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98467 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.445 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08379 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1087 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1251188 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.062 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.062 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08736 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.825 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.643 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1010 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1067252 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.693 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.693 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95075 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.089 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1919 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.986 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.17 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00327 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96704 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -297.568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.045 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 991 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1039928 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.045 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.045 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00988 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.603 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00512 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03398 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.51 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.479 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95055 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.991 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72998 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.443 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.473 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02774 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.052 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01354 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60392 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1034 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1100132 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -298.952 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -298.952 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -298.952 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.113 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60431 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.76299 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.347 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -298.425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -299.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.02231 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.95494 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1061 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1171708 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.074 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.074 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.8349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.4 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.85899 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.953 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.85946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.203 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.85937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.254 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.98698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90062 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1057 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1201320 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.504 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -302.504 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -302.504 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -305.266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.823 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85495 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.278 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85676 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87469 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87211 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.004 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.954 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1016 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1050640 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.312 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.312 -306.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.312 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.24 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91442 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.689 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.93046 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.502 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92432 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90386 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.818 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91611 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.86 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1032 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1092632 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -304.492 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -304.492 -306.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -304.492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87597 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.86702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.499 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07213 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.222 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16619 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.084 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15629 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13987 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03526 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.014 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.076 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98038 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.258 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.775 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90363 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90741 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.532 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1017 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1022232 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.542 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.542 -306.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.542 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.47 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76143 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.314 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.75932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.615 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87064 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.048 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89344 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81128 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.895 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67296 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.108 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66785 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.872 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1031 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1102496 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.872 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.872 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.872 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.76776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.472 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79326 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.26 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.655 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7805 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77238 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.551 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.73905 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.707 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72263 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.73139 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.99 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.024 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1020 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1078184 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.024 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.024 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.024 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68877 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.321 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.70975 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.624 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68799 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67446 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.70747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.408 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.035 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.58646 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.634 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.61275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.793 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.61426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.735 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1025 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1085344 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.735 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.735 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.735 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63543 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.121 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6248 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.184 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.628 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.284 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.183 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63713 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.65434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64763 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.65106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.64511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.474 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67391 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.758 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1054 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1170420 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -305.758 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -305.758 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -305.758 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.869 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80766 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81188 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80554 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.453 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81419 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80371 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.822 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.752 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85977 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.265 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.55 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1051 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1163172 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -306.55 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -306.55 -308.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -306.55 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.84279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.943 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83558 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.772 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.66879 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.66418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.637 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.69266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.69309 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.60239 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.736 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 984 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1008476 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.74 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.74 -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.74 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61897 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.428 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60999 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.60087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.454 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.552 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.64621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.369 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62882 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.968 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 987 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1009588 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.968 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.968 -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60537 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.6008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58002 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.708 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60961 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60782 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60781 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.199 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 987 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1011320 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.199 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.199 -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59305 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58457 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58359 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.59635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58844 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.82 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.206 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.59476 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.236 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63698 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.372 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.338 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1045 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1142396 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.55 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.55 -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.55 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.64082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.136 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.70461 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.71337 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.73019 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.612 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73979 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.325 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.746 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82058 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1092 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1231108 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.982 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.982 -313.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.982 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.8031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.627 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81307 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.669 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.993 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.79866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78916 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.208 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76776 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78524 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.875 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7915 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78777 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.41 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78592 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.745 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77663 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.438 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.569 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.77383 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.973 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1088 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1231144 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.863 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.973 -313.216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.973 protocols.moves.TrialCounter: kic_refine_r1 trials= 373; accepts= 0.3700; energy_drop/trial= -0.04751 protocols.moves.TrialCounter: kic_refine_r2 trials= 375; accepts= 0.3627; energy_drop/trial= 0.02121 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9545; energy_drop/trial= -0.27444 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: 124.984 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 9 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.453863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.246 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.507424 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.494409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.8 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.504586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.017 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.518509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.495147 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.936 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.497054 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.02 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.466422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.411 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.01063 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.444 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.00189 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.413 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.81323 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.881759 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.48 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.788425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.77868 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.830734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -301.945 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.827702 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.28894 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.21529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.666 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.24286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47935 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.267 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4964 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.301 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1030 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1113656 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.301 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.301 -307.301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.301 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50441 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.416 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50026 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.545 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50303 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.682 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.71417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72694 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.157 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.66134 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.159 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.42621 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.42944 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.169 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.35505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.583 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.939 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.22862 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.37 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.1651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.243 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.2475 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.42245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.673 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.40885 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.839 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.46635 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.878 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 999 rotamers at 48 positions. core.pack.pack_rotamers: IG: 999140 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -304.88 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -304.88 -308.531 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -304.88 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.47355 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.48095 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.28266 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.651 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.29152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.175 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.29819 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.152 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.30528 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.30725 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.426 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.27422 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.596 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.28466 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.308 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.30405 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.26097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.25279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.544 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.26436 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.477 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21797 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.22034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.295 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1056 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1136040 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.295 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.295 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.22974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.26409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.606 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.26959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.97 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.27028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.016 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.25587 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.515 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.36022 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.35104 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.756 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31351 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.2783 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23906 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.697 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.26522 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.878 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.30748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.349 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.33375 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.33425 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1127 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1339992 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.094 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.094 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.094 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.33711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21739 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.22374 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.938 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21119 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.949 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.26412 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.683 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.26757 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.34 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.22789 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.653 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.132 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.30037 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1665 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.824 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.18154 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18567 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19332 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.091 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1041 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1143144 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.091 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.091 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.091 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.059 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.27692 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.724 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.27679 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.26414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30808 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.081 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32456 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.505 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.33088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.025 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32754 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.177 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3285 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -302.39 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4609 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42168 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4329 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.417 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41866 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.471 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40898 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.807 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1045 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1116760 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -308.91 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.91 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40685 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.933 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40288 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.917 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40041 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40503 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.771 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.25341 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.538 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.26577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.492 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.25941 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.699 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.25742 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.762 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22645 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.66 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19942 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.85 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20841 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.95 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21047 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.625 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30092 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.274 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1099 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1200924 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.289 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.289 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.289 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2 -309.295 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.28212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.681 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.28376 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.737 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.23594 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.22817 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.079 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.22568 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.057 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.07069 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.811 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.09322 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.765 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0221 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.015 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.57636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.352 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.55536 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.137 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39088 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.166 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41097 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.743 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37182 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.56294 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.969 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1224 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1665956 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.995 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.995 -310.225 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.995 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52804 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.31 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52859 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.401 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52003 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.969 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42212 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.768 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42145 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.593 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42237 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.279 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41061 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.06 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.636 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36832 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.042 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37011 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.989 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36605 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.891 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.106 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.43652 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.12 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42005 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.418 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1226 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1628340 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.418 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.418 -310.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42219 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40414 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.786 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40102 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.981 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.393 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39114 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40357 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41074 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41693 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.56273 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.481 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62447 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54731 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.921 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52888 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.297 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52976 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.249 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.045 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38951 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.836 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1256 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1723260 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -303.758 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.836 -310.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.836 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38948 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.852 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39784 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.96 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39814 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45519 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.723 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45838 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45687 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45373 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.161 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46896 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.27 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4668 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46286 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.18 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46711 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.009 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46902 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.328 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47216 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.586 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48722 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.539 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1243 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1690396 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -309.539 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -309.539 -311.27 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -309.539 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4796 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.918 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47437 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47028 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.959 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.112 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.69463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.584 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.018 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58579 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58904 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.172 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59196 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.205 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60174 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.67 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60706 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.562 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70364 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.867 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67962 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -309.794 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.69043 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70122 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.78 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68773 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.561 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68073 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.654 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1241 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1682432 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -302.569 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -308.654 -311.27 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -308.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67555 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.448 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.863 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77053 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.76674 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.659 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.77491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.167 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74834 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.602 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.74747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.71 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.73932 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.865 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.9082 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.732 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88525 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.712 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88733 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1050 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1125832 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -310.484 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -310.484 -312.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -310.484 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.8971 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.632 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.88618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.907 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.88934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.577 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.86994 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.334 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.87616 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.835 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.92096 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.985 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91662 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.792 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.91244 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.703 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89656 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.138 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89077 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.639 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.90688 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.934 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.496 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.89744 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.529 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.8978 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.29 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1050 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1137064 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.293 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.293 -312.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.293 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3 -312.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.77566 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.434 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.7747 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.199 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.76202 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.997 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67571 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.992 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67039 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.271 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67395 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.66 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67353 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.638 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.984 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.107 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67191 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.001 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.155 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67798 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.245 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1084 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1234980 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.245 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.245 -312.675 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.245 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60326 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61826 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.049 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.029 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60385 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.066 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.60008 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.623 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64929 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.657 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.007 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62631 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.513 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63874 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.591 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63729 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1245 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1697536 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.576 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.576 -312.709 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.576 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63065 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.803 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63429 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.968 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.6333 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.648 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63842 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.38 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68324 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.491 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64889 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.087 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.66507 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1225 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1632348 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -313.719 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -313.719 -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.6701 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -313.556 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68418 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.486 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68339 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.55 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.68947 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.404 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.68511 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.718 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67345 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.806 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.66242 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.642 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1223 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1624548 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.654 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.654 -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.654 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.66622 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.73 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.66922 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.563 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.67207 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.858 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.6779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.69215 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.671 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70876 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62192 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.58 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62257 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -310.778 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63608 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.031 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.66684 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.162 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.67144 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.581 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1059 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1167264 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -312.581 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -312.581 -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -312.581 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.66449 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.451 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.66769 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.365 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.63 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.767 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62853 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.24 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62253 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.91 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61926 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.575 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64268 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.071 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.63972 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.483 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1057 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1154608 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.483 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.483 -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.483 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62264 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.795 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.53156 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.748 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54974 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -312.224 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44532 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.937 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.43955 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.847 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.44195 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -311.755 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1088 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1236280 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -311.755 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -311.755 -313.719 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -311.755 protocols.moves.TrialCounter: kic_refine_r1 trials= 386; accepts= 0.3705; energy_drop/trial= -0.03721 protocols.moves.TrialCounter: kic_refine_r2 trials= 371; accepts= 0.3720; energy_drop/trial= -0.00541 protocols.moves.TrialCounter: repack trials= 22; accepts= 0.9091; energy_drop/trial= -0.18153 antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle antibody2.AntibodyUtil: Base Dihedral: -157.982 antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0 protocols.antibody2.RefineOneCDRLoop: Trying Refinement ................. 10 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5 core.pack.task: Packer task: initialize from command line() protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1111 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1284596 bytes core.pack.task: Packer task: initialize from command line() protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.837 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1 -293.837 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.519366 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.553 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.456068 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.831 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.295601 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -300.142 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.62187 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.506 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.6204 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.086 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.62193 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.125 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.61458 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.642 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.60726 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.705 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89342 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89178 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.291 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85903 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.034 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83367 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.098 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.76827 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.209 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.78509 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -306.067 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.59033 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.815 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.59829 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.618 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.59409 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph core.pack.pack_rotamers: built 1110 rotamers at 48 positions. core.pack.pack_rotamers: IG: 1313704 bytes protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -307.779 protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -307.779 -308.131 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -307.779 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.61292 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.644 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.60946 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -308.489 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.1126 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -303.548 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.96163 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -307.546 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96105 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.966 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.97521 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.641 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.87013 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -305.734 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.88463 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -304.275 protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.90703 protocols.loops.loop_mover.refine.Loo