core.init: Mini-Rosetta version 52530 from https://svn.rosettacommons.org/source/trunk/rosetta/rosetta_source
core.init: command: condor_exec.exe -seed_offset 12 -database /home/rosie/rosie/rosie.back/data/antibody/rosetta_database -s FR_0001.pdb -scorefile score.sf -multiple_processes_writing_to_one_directory -ex1 -ex2 -antibody::remodel perturb_kic -antibody::snugfit true -antibody::refine refine_kic -antibody::cter_insert false -antibody::flank_residue_min true -antibody::h3_filter true -antibody::h3_filter_tolerance 20 -antibody::h3_no_stem_graft true -nstruct 50
core.init: 'RNG device' seed mode, using '/dev/urandom', seed=-1466935567 seed_offset=12 real_seed=-1466935555
core.init.random: RandomGenerator:init: Normal mode, seed=-1466935555 RG_type=mt19937
protocols.antibody2.AntibodyModelerProtocol: Setting Up defaults..........
protocols.antibody2.AntibodyModelerProtocol: Start Reading and Setting Options ...
protocols.antibody2.AntibodyModelerProtocol: Finish Reading and Setting Options !!!
core.scoring.etable: Starting energy table calculation
core.scoring.etable: smooth_etable: changing atr/rep split to bottom of energy well
core.scoring.etable: smooth_etable: spline smoothing lj etables (maxdis = 6)
core.scoring.etable: smooth_etable: spline smoothing solvation etables (max_dis = 6)
core.scoring.etable: Finished calculating energy tables.
basic.io.database: Database file opened: scoring/score_functions/PairEPotential/pdb_pair_stats_fine
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBPoly1D.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBFadeIntervals.csv
basic.io.database: Database file opened: scoring/score_functions/hbonds/standard_params/HBEval.csv
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN6_mem_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/CEN10_mem_env_log.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/memcbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/MembranePotential/mem_pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_n
basic.io.database: Database file opened: scoring/score_functions/P_AA_pp/P_AA_pp
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/env_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cbeta_den.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/pair_log.txt
basic.io.database: Database file opened: scoring/score_functions/EnvPairPotential/cenpack_log.txt
basic.io.database: Database file opened: scoring/score_functions/rama/Rama_smooth_dyn.dat_ss_6.4
protocols.antibody2: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2: ///
protocols.antibody2: ///                     Rosetta 3 Antibody Modeler                           ///
protocols.antibody2: ///                                                                          ///
protocols.antibody2: ///  camelid              : 0
protocols.antibody2: ///
protocols.antibody2: /// ******  model_h3  :  1
protocols.antibody2: ///         h3_perturb_type     = 'perturb_kic'
protocols.antibody2: ///         cter_insert         = 0
protocols.antibody2: ///         h3_filter           = 1
protocols.antibody2: ///
protocols.antibody2: /// ******  snugfit   :  1
protocols.antibody2: ///         LH_repulsive_ramp   = 1
protocols.antibody2: ///
protocols.antibody2: /// ******  refine_h3 :  1
protocols.antibody2: ///         h3_refine_type      = 'refine_kic'
protocols.antibody2: ///         h3_filter           = 1
protocols.antibody2: ///         h3_filter_tolerance = 20
protocols.antibody2: ///
protocols.antibody2: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2: 
protocols.jd2.PDBJobInputter: Instantiate PDBJobInputter
protocols.jd2.PDBJobInputter: PDBJobInputter::fill_jobs
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 1
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 2
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 3
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 4
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 5
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 6
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 7
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 8
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 9
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 10
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 11
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 12
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 13
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 14
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 15
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 16
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 17
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 18
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 19
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 20
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 21
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 22
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 23
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 24
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 25
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 26
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 27
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 28
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 29
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 30
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 31
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 32
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 33
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 34
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 35
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 36
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 37
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 38
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 39
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 40
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 41
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 42
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 43
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 44
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 45
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 46
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 47
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 48
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 49
protocols.jd2.PDBJobInputter: pushing FR_0001.pdb nstruct index 50
protocols.evaluation.ChiWellRmsdEvaluatorCreator: Evaluation Creator active ... 
protocols.jd2.PDBJobInputter: PDBJobInputter::pose_from_job
protocols.jd2.PDBJobInputter: filling pose from PDB FR_0001.pdb
core.chemical.ResidueTypeSet: Finished initializing fa_standard residue type set.  Created 6352 residue types
core.conformation.Conformation: Found disulfide between residues 132 206
core.conformation.Conformation: current variant for 132 CYS
core.conformation.Conformation: current variant for 206 CYS
core.conformation.Conformation: current variant for 132 CYD
core.conformation.Conformation: current variant for 206 CYD
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.AntibodyModelerProtocol: AAAAAAAA     cst_weight: 0
protocols.antibody2.AntibodyModelerProtocol: Danger Will Robinson! Native is an impostor!
protocols.antibody2.AntibodyModelerProtocol:    'native_pose' is just a copy of the 'input_pose'    
protocols.antibody2.AntibodyModelerProtocol:     since you didn't sepcifiy the native pdb name
antibody2.AntibodyInfo: Successfully finished the CDR defintion
antibody2.AntibodyInfo: AC Detecting Regular CDR H3 Stem Type
antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: KINKED
antibody2.AntibodyInfo: AC Finished Detecting Regular CDR H3 Stem Type: Kink: 1 Extended: 0
protocols.antibody2.AntibodyModelerProtocol: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2.AntibodyModelerProtocol: ///                          Rosetta Antibody Info                           ///
protocols.antibody2.AntibodyModelerProtocol: ///                                                                          ///
protocols.antibody2.AntibodyModelerProtocol: ///             Antibody Type:  Regular Antibody
protocols.antibody2.AntibodyModelerProtocol: /// Predict H3 Cterminus Base:  KINKED
protocols.antibody2.AntibodyModelerProtocol: ///                                                                          
protocols.antibody2.AntibodyModelerProtocol: /// H1 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  10
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  GYTFTNYGMN
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 136 145 141 0 0
protocols.antibody2.AntibodyModelerProtocol: /// H2 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  17
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  WINTYTGEPTYADDFKE
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 160 176 168 0 0
protocols.antibody2.AntibodyModelerProtocol: /// H3 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  14
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  DYYGSTYPYYAMDY
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 209 222 210 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L1 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  12
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  RASSSVSSSYLH
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 24 35 30 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L2 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  7
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  STSNLAS
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 51 57 54 0 0
protocols.antibody2.AntibodyModelerProtocol: /// L3 info: 
protocols.antibody2.AntibodyModelerProtocol: ///           length:  9
protocols.antibody2.AntibodyModelerProtocol: ///         sequence:  QQYSGYPYT
protocols.antibody2.AntibodyModelerProtocol: ///        loop_info:  LOOP 90 98 94 0 0
protocols.antibody2.AntibodyModelerProtocol: ////////////////////////////////////////////////////////////////////////////////
protocols.antibody2.AntibodyModelerProtocol: 
protocols.antibody2.H3CterInsert: Reading CDR H3 C-ter Fragments
protocols.antibody2.H3CterInsert: LOOP 209 222 210 0 0
protocols.antibody2.H3CterInsert: cdr_h3_size=14
protocols.antibody2.H3CterInsert: aa_1name.size()=18
protocols.antibody2.H3CterInsert: ARDYYGSTYPYYAMDYWG
protocols.antibody2.H3CterInsert: Finished reading CDR H3 C-ter Fragments
protocols.antibody2.ModelCDRH3: Applying CDR H3 modeler
antibody2.AntibodyUtil: Utility: Setting up simple one loop fold tree
antibody2.AntibodyUtil: Utility: Finished setting up simple one loop fold tree
core.chemical.ResidueTypeSet: Finished initializing centroid residue type set.  Created 1980 residue types
core.conformation.Conformation: Found disulfide between residues 22 96
core.conformation.Conformation: current variant for 22 CYS
core.conformation.Conformation: current variant for 96 CYS
core.conformation.Conformation: current variant for 22 CYD
core.conformation.Conformation: current variant for 96 CYD
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: ALL_LOOPS:LOOP  begin  end  cut  skip_rate  extended
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: SELECTEDLOOPS:LOOP  begin  end  cut  skip_rate  extended
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: 
protocols.loops.loops_main: Pose fold tree FOLD_TREE  EDGE 1 207 -1  EDGE 207 210 -1  EDGE 207 224 1  EDGE 224 211 -1  EDGE 224 232 -1 
protocols.loops.loops_main: 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Setting extended torsions: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop: LOOP 209 222 210 0 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Building Loop attempt: 0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: perturb_one_loop_with_KIC: 209 14
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel init temp: 2
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: remodel final temp: 1
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: kinematic initial perturb with start_res: 209  middle res: 215  end_res: 222
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd before initial kinematic perturbation:0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Attempting loop building: 0 ... 
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: initial kinematic perturbation complete
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: loop rmsd after initial kinematic perturbation:6.83353
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -36.745 -36.745
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82768
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.82459
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93574
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39367
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.48899
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.55069
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39599
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.38875
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39191
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.38648
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39812
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.40332
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.40648
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39706
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2645
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2146
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2504
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.94667
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.0381
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.0419
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.0424
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.4849
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.484
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.1854
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.4163
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.934
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.9308
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.9304
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.311
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3065
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3015
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7573
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7504
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.56462
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.55432
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.91471
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.87481
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.39898
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42173
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.42413
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.45329
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.22618
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.05863
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.67293
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.67129
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68473
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.67485
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.97599
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.88606
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.04698
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.10338
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.09917
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.11166
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.94972
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.94919
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.03426
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.41411
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39801
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.22678
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.22489
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.22651
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.23203
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.36781
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.36057
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.56371
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.95043
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68609
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.63996
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.43783
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.27003
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.27034
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.27187
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.26069
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.18526
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89103
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.35279
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.31646
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.35171
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.35239
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.3118
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.65945
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.68619
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.24434
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.30878
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.45467
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.44272
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.49913
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.50145
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.5031
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.08501
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00842
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.9934
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.97966
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76817
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76359
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.76843
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65648
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.69839
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63673
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67138
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.66193
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.65499
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85495
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85308
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.84283
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4706
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45957
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.45225
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3193
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31875
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32848
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.35548
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.30982
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30429
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.29925
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.20933
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.27664
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.40354
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.25334
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.2663
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.12508
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85634
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.85398
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78275
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87755
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88447
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87657
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6346
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.0305
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.88877
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.86671
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.80394
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.62083
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.57575
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0996
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0959
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0956
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.1132
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0726
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0552
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0668
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0692
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0188
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.9888
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.2999
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.264
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3008
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.5299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.864
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8518
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8495
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8561
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6865
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6851
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6554
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6218
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6186
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6331
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6362
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8088
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8032
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8304
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.6686
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9396
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9439
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9436
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9432
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.7032
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.7056
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.705
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.6999
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.0871
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.0807
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.0954
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9759
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.03299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06043
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.11387
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.13707
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.1403
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34975
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3215
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31751
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28986
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27158
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.28431
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27947
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.90659
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.86826
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09792
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.9831
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.4053
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.343
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3981
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3657
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.136
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.1178
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.1208
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.5784
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.563
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8991
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8871
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.881
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9048
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9793
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9844
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8672
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8614
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.8588
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.859
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2237
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.2202
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.30075
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33779
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.45551
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.40568
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96772
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.91253
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.9064
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.89377
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.88122
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.92479
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63854
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.69869
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.57714
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56955
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56428
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64975
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.64896
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67832
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67693
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68341
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.642
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63201
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61083
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.63907
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78315
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78134
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.87373
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.8892
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.89007
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.75277
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7269
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.73068
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72299
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.72709
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.5974
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60482
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60458
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.60909
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56479
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56248
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.53001
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.5102
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.53447
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.5252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.52124
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61165
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.62956
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.6716
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61957
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.73239
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.5525
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7186
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7166
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7468
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.7482
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.76
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.8868
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.894
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 10.8797
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.004
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0024
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.0142
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.0488
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 12.0754
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9928
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9437
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9421
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.9424
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3175
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 11.3252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.71854
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.70991
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09327
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04595
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.6584
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68623
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.68548
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.73993
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.81033
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.06406
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 9.03558
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.39617
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.40383
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.38868
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.10834
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.78298
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.23258
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21108
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21329
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21687
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.21213
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.24282
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.24097
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06006
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06116
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.03038
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.02898
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.02885
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.94033
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.93741
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.04642
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.06133
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09834
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09817
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.09215
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08946
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08523
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08787
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.08668
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.00307
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.99966
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.75328
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.76273
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.7627
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.73503
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68541
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.67043
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.68802
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42669
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42447
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.43963
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51306
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51175
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27483
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.61822
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56696
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.56655
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.43338
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.43315
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.40255
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.40748
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4037
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.40132
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.40383
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.38611
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.3783
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.36507
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37174
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37394
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.37052
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32181
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31331
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33937
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33902
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33951
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33006
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4341
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.4397
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25059
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.25339
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.24232
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.23147
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.11645
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.11178
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.12239
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.1228
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.12261
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.11138
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 8.10872
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.5425
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.58323
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.56783
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.57187
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.61171
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.60913
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.6379
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.68142
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.68593
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02313
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02093
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.99032
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.02895
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03493
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.03979
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04199
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.04225
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.10263
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.13119
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09847
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.09598
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.70911
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.71763
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96515
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96064
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.96566
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.28532
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.34049
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33701
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.35063
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33285
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33257
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33458
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.3207
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.33487
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.4248
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.35348
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.39003
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.38319
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.67221
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66198
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.64424
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.66255
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65533
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.65034
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.68904
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.69255
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.68962
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.31767
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32018
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.49177
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51262
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.51885
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.43796
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.43505
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41883
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42942
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41274
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.41746
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.08781
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.44757
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.42839
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.34787
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.32653
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33116
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.33242
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27147
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.27012
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.21479
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.952
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.23031
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 7.22754
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.19958
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.18664
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.67357
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.67584
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.67709
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.71436
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72014
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72032
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72097
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 6.72807
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.29792
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.29726
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.29904
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.20479
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.2121
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.21893
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.25356
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.20619
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.21857
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.21534
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17033
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17386
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17359
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.16943
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17657
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.1756
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17359
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.182
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.18138
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.1807
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.17871
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.35749
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.36428
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39397
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39632
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.3912
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39653
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.36157
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.35742
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.40221
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.40716
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.4084
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.407
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.352
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.43707
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.42368
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.42137
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.42292
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41357
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41008
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41015
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41183
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41231
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41614
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.41797
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.4247
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39632
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39477
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.39233
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.38484
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.38172
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.38167
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.37458
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.37365
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.38282
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.37651
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.14524
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.1196
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.11949
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.05352
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.04659
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.0841
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.06754
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.22603
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.22451
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.22914
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.21575
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52019
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.35098
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.23899
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.18598
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.18069
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.16158
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.15747
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.15854
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.96271
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.95587
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.94686
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.94689
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.94526
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.95527
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.98147
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.9835
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.99216
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.92896
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 3.92852
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.2518
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.24901
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.252
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.24839
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.25204
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.2663
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.26562
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.2706
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28605
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28829
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28759
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28181
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.31492
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.3177
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28692
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28699
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28282
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.28628
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.32817
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.33109
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.37445
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.37068
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.49102
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.52391
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.51336
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: new centroid perturb rmsd: 4.45818
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: result of loop closure:0 success, 3 failure 0
protocols.loops.loop_mover.perturb.LoopMover_Perturb_KIC: Loopstat:   209  222  209  222   14  time 168.0    0  time   0.0  -86.2098   ext 
protocols.antibody2.ModelCDRH3: Finished Modeling Centroid CDR H3 loop
protocols.antibody2.ModelCDRH3: Finished applying CDR H3 modeler
protocols::checkpoint: Deleting checkpoints of LoopMover
protocols.antibody2.CDRsMinPackMin: FOLD_TREE  EDGE 1 23 -1  EDGE 23 36 1  EDGE 23 30 -1  EDGE 36 31 -1  EDGE 36 50 -1  EDGE 50 58 2  EDGE 50 54 -1  EDGE 58 55 -1  EDGE 58 89 -1  EDGE 89 99 3  EDGE 89 94 -1  EDGE 99 95 -1  EDGE 99 135 -1  EDGE 135 146 4  EDGE 135 141 -1  EDGE 146 142 -1  EDGE 146 159 -1  EDGE 159 177 5  EDGE 159 168 -1  EDGE 177 169 -1  EDGE 177 208 -1  EDGE 208 223 6  EDGE 208 210 -1  EDGE 223 211 -1  EDGE 223 232 -1 
protocols.antibody2.CDRsMinPackMin: 
protocols.loops.loops_main: Added cutpoint variants: RES: 30
protocols.loops.loops_main: Added cutpoint variants: RES: 54
protocols.loops.loops_main: Added cutpoint variants: RES: 94
protocols.loops.loops_main: Added cutpoint variants: RES: 141
protocols.loops.loops_main: Added cutpoint variants: RES: 168
protocols.loops.loops_main: Added cutpoint variants: RES: 210
basic.io.database: Database file opened: scoring/score_functions/disulfides/fa_SS_distance_score
core.pack.dunbrack: Dunbrack library took 0.07 seconds to load from binary
antibody2.AntibodyUtil: Utility: Setting Up Packer Task
antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 4121 rotamers at 148 positions.
core.pack.pack_rotamers: IG: 6967664 bytes
protocols.antibody2.RefineBetaBarrel:    start finalize_setup function ...
antibody2.AntibodyUtil: Utility: Setting Up Packer Task
antibody2.AntibodyUtil: Utility: Done: Setting Up Packer Task
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.RefineBetaBarrel: FOLD_TREE  EDGE 1 23 -1  EDGE 23 30 -1  EDGE 23 36 2  EDGE 36 31 -1  EDGE 36 50 -1  EDGE 50 54 -1  EDGE 50 58 3  EDGE 58 55 -1  EDGE 58 87 -1  EDGE 87 89 -1  EDGE 89 94 -1  EDGE 87 134 1  EDGE 134 111 -1  EDGE 89 99 4  EDGE 99 95 -1  EDGE 99 110 -1  EDGE 134 135 -1  EDGE 135 141 -1  EDGE 135 146 5  EDGE 146 142 -1  EDGE 146 159 -1  EDGE 159 168 -1  EDGE 159 177 6  EDGE 177 169 -1  EDGE 177 208 -1  EDGE 208 210 -1  EDGE 208 223 7  EDGE 223 211 -1  EDGE 223 232 -1 
protocols.antibody2.RefineBetaBarrel: 
protocols.loops.loops_main: Added cutpoint variants: RES: 30
protocols.loops.loops_main: Added cutpoint variants: RES: 54
protocols.loops.loops_main: Added cutpoint variants: RES: 94
protocols.loops.loops_main: Added cutpoint variants: RES: 141
protocols.loops.loops_main: Added cutpoint variants: RES: 168
protocols.loops.loops_main: Added cutpoint variants: RES: 210
protocols.antibody2.RefineBetaBarrel:    finish finalize_setup function !!!
protocols.antibody2.LHRepulsiveRamp: start apply function ...
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 1:     rep_weight = 0.02
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.02) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 2:     rep_weight = 0.10284
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.10284) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp:    repulsive ramp cycle 3:     rep_weight = 0.18568
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 2                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   1
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   2
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   3
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.LHRepulsiveRamp:        doing rb_mover_min_trial in the DockMCMCycle  ...   4
protocols.antibody2.LHRepulsiveRamp: finish apply function !!!
protocols.antibody2.RefineBetaBarrel:    finish repulsive ramping !
protocols.docking.DockMCMProtocol: in DockMCMProtocol.apply
protocols.docking.DockMCMProtocol: Using the DockingTaskFactory.
protocols.docking.DockMCMCycle: Setting up defaults for DockMCMCycle: 
protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
protocols.docking.DockMCMCycle: /// Dockable Jumps: 1                                                        ///
protocols.docking.DockMCMCycle: /// Translation: 0.1                                                         ///
protocols.docking.DockMCMCycle: /// Rotation: 5                                                              ///
protocols.docking.DockMCMCycle: /// Scorefunction:                                                           ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.338) (fa_rep 0.18568) (fa_sol 0.242) (hack_elec 0.026) (fa_pair 0.164) (hbond_sr_bb 0.245) (hbond_lr_bb 0.245) (hbond_bb_sc 0.245) (hbond_sc 0.245) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.036) (chainbreak 1) (overlap_chainbreak 3.33333)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: /// Packing scorefunction:                                                   ///
protocols.docking.DockMCMCycle: ScoreFunction::show():
weights: (fa_atr 0.8) (fa_rep 0.44) (fa_sol 0.65) (fa_intra_rep 0.004) (pro_close 1) (fa_pair 0.49) (hbond_sr_bb 1.17) (hbond_lr_bb 1.17) (hbond_bb_sc 1.17) (hbond_sc 1.1) (dslf_ss_dst 0.5) (dslf_cs_ang 2) (dslf_ss_dih 5) (dslf_ca_dih 5) (fa_dun 0.56) (p_aa_pp 0.64) (ref 1)
energy_method_options: EnergyMethodOptions::show: etable_type: FA_STANDARD_DEFAULT
analytic_etable_evaluation: 0
EnergyMethodOptions::show: method_weights: ref 0.16 1.7 -0.67 -0.81 0.63 -0.17 0.56 0.24 -0.65 -0.1 -0.34 -0.89 0.02 -0.97 -0.98 -0.37 -0.27 0.29 0.91 0.51
EnergyMethodOptions::show: unfolded_energies_type: UNFOLDED_SCORE12
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: atom_vdw_atom_type_set_name: centroid
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_protein_protein_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_monomer_hack_elec: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_max_dis: 5.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_min_dis: 1.5
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_die: 10
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: hackelec_no_dis_dep_die: false
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: cst_max_seq_sep: 18446744073709551615
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_central_atoms_to_score:
protocols.docking.DockMCMCycle: EnergyMethodOptions::show: bond_angle_residue_type_param_set: none
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_DNA_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: include_intra_res_RNA_: false
protocols.docking.DockMCMCycle: HBondOptions::show: exclude_self_hbonds: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: use_hb_env_dep_DNA: true
protocols.docking.DockMCMCycle: HBondOptions::show: smooth_hb_env_dep: true
protocols.docking.DockMCMCycle: HBondOptions::show: bb_donor_acceptor_check: true
protocols.docking.DockMCMCycle: HBondOptions::show: decompose_bb_hb_into_pair_energies: false
protocols.docking.DockMCMCycle: HBondOptions::show: params_database_tag_: standard_params
protocols.docking.DockMCMCycle: HBondOptions::show: use_incorrect_deriv_: false
protocols.docking.DockMCMCycle: HBondOptions::show: use_sp2_chi_penalty_: false
protocols.docking.DockMCMCycle: HBondOptions::show: sp2_BAH180_rise_: 0.75
protocols.docking.DockMCMCycle: HBondOptions::show: measure_sp3acc_BAH_from_hvy_: false
protocols.docking.DockMCMCycle: HBondOptions::show: Mbhbond: false 
protocols.docking.DockMCMCycle: 

protocols.docking.DockMCMCycle: ////////////////////////////////////////////////////////////////////////////////
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1222 rotamers at 43 positions.
core.pack.pack_rotamers: IG: 1050796 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1161 rotamers at 41 positions.
core.pack.pack_rotamers: IG: 1002992 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1161 rotamers at 41 positions.
core.pack.pack_rotamers: IG: 1002992 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1184 rotamers at 43 positions.
core.pack.pack_rotamers: IG: 1042052 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1203 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1060208 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1174 rotamers at 42 positions.
core.pack.pack_rotamers: IG: 1027192 bytes
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
core.pack.task: Packer task: initialize from command line() 
protocols.antibody2.RefineBetaBarrel:    finish L_H Docking !
protocols.antibody2.RefineBetaBarrel: FINISH BETA BARREL REFINEMENT STEP !! 
antibody2.AntibodyUtil: Utility: Setting up simple fold tree
antibody2.AntibodyUtil: Utility: Finished setting up simple fold tree
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -275.643 -275.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -275.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.781446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.772014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.58742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.533
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.47924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.46913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.46393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.49756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.50293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.51157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.51429
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.756
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1149 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1201956 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.756
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.756 -285.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60456
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.215
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.54491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.55227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.58239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.62
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.507
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.11086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.21799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.634
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1118 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1099228 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -281.635
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -281.635 -285.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -281.635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.54645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.8999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1097 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1113804 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.285
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.285 -286.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.8978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.82368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23854
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23573
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1203 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1373272 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.796
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.796 -286.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1166 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1323556 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.185
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.185 -286.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.31635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.87
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33206
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.014
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1091 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1072812 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.015
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.015 -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.31687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.35
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1093 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1071356 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.35
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.35 -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.35
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.37226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37351
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25271
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1107 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1112472 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.915
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.915 -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1085 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1051720 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.168
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.168 -286.802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.168
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.58796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.78284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.81396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.791
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1004 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 846512 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.792
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.792 -289.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.82
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1228 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1389404 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.517
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.517 -291.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.22
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 983 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 810480 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.372
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.118 -291.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.259
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.91256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.88998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.868
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 998 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 796216 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.638
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.638 -291.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.25968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.27091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.26504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.2523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.46525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.886
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1005 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 781876 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.886
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.886 -291.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -291.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.27428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.95
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.87
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.337
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 993 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 791276 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.418
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.418 -293.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.58332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.53127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.88
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.52693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.55406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.52261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.53418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.51305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.41133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.823
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.40069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1029 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 839232 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.817
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.817 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.92
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1202 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1366256 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.399
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.399 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.34717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.09
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.3454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.3558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.72
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.083
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 898 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 611832 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.732
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.732 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.96375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.77817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.261
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 920 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 637548 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.006
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.006 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.7042
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.84065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86737
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.81462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.509
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 930 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 658756 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.651
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.651 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.88302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.89297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.86649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 846 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 509540 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.765
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.765 -293.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.765
protocols.moves.TrialCounter:    kic_refine_r1 trials=    386;  accepts= 0.3782;  energy_drop/trial=   0.01028
protocols.moves.TrialCounter:    kic_refine_r2 trials=    390;  accepts= 0.3359;  energy_drop/trial=  -0.04472
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 0.9545;  energy_drop/trial=  -0.95416
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 118.295
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.782064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.896708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.883446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.00515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.00966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.737
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.01062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.05901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.0505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.34607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.45106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.61486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.39175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.39433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -273.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.38837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 8.24053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -272.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 8.25461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.21777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -274.504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.52584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.64529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.29644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.29046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.29092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.27425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.585
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1293 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1650064 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -279.436
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -279.436 -283.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -279.436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.18743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.23
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.18136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.84133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.88619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.86908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.86781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.90178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.19
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.85224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.86141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.82664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.79898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.76942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.17
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.50233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.50788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.50052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.98
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.38091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.4072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.40324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.38583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1181 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1418536 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.044
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.044 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.40641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.39647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.33992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.30147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.29925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.60899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.59815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.74047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.82361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.85022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.85411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.94239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.95927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.013
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1112 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1190836 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.013
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.013 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.93671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.95078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.95343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.94769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.95238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.97292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.91673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.9019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.03002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.97842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.97523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.97359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.00128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.97213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.97408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.95369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.96723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1112 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1187940 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -281.308
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -281.308 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -281.308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.95772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.96748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.96815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.9755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.79565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.19
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.74391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.74377
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.7373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.74002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.75164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.69833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.69348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.69333
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.71751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.67416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.68262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.69899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.67559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.68859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.65962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.612
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1152 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1312220 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.228
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.228 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.64875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.63003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.6101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.92638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.93922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.95485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.07785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.11198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.0999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.08237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.9
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1118 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1212260 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.9
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.9 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.06348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.08783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.08598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.06584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.04487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.07175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.07998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.98676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.99833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.00068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.16
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.95138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.31
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1116 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1214252 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.31
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.31 -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -290.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.40769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.4034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.47801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.48629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.3808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.37461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.27635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.25645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.25186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.977
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1146 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1311064 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.977
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.977 -290.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.26186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.25096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.24518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.26306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.92
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.24758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.26397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.29178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.30961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.17411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.18417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11222
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.327
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.03475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1142 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1278292 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.223
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.223 -290.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.02532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.05907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.61
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.88928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.88195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.01035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99456
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.93754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1145 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1282336 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.269
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.269 -290.269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.269
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.93205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.48
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1146 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1291428 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.616
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.616 -290.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.98943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.96905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.03
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.62
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.9967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.96683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.18898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.19358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.643
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1161 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1338696 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.643
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.643 -290.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.19422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.42
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.19276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.16662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.17443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.1918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.19388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.85
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.10915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.09982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.08214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.2
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1143 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1285168 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.2
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.2 -290.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.07672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.08599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.09123
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.09974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.11914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.10521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.11944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.08912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.08407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1153 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1301720 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.843
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.843 -290.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -290.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.09248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.06758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.06699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.08845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.08108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.11745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.13386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.339
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1145 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1294648 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.339
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.339 -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.15015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.14431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.14845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.14706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.13299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.14001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21604
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.01
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1137 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1269508 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.098
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.098 -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.098
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.27683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.26782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.26286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.946
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.35764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.36332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.32714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.33541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.3201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.30538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.29855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.517
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1152 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1306204 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.98
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.98 -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.98
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.26903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.24822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.58
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2098
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.19717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.19889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.92065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.91948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.91669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1127 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1264476 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.174
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.174 -290.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.08913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.07083
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.06953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.07085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.507
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.0587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.03427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.15
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.83214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.81215
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.8101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.80358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.81307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.97884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1149 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1256796 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.666
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.666 -291.682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.876
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.98581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.41528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1132 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1243196 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.72
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.72 -294.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.72
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.42486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.34119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.32928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1129 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1228120 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.052
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.052 -294.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.052
protocols.moves.TrialCounter:    kic_refine_r1 trials=    397;  accepts= 0.3602;  energy_drop/trial=  -0.04097
protocols.moves.TrialCounter:    kic_refine_r2 trials=    393;  accepts= 0.3639;  energy_drop/trial=   0.00952
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.88571
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -171.792
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.877273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.904837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.2477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.05
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.25265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.02
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.23786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.188
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.25941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.06
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.24351
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.24826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.91
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.34965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.33776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.91
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.33264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32921
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.33445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 937 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 665704 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.54
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.54 -290.798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.41
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.79819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.13
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.8448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.82157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.85051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.608
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 939 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 670676 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.608
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.608 -291.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.951
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 966 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 692260 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.417
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.417 -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.98117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.43
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.41
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.11373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.98186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.98008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.09316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.916
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1079 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1053924 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.174
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.174 -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.98621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.04
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80937
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.245
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.35
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.121
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.70306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.55
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 856 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 513012 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.55
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.55 -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.55
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.49
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.6941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.65864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.246
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 859 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 510532 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.246
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.246 -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.51722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.73942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.73984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.69653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.88756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.224
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1047 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 904708 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.224
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.224 -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -291.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02335
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.11
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.71
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.596
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 938 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 662868 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.596
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.596 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.442
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.06171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.18754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 974 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 700676 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.213
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.213 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.08897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.681
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.10796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.71
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90051
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91597
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.86
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 970 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 693944 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.868
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.868 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.868
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90947
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.95
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.96316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.06
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88317
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1000 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 830500 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.036
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.036 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.75857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.7338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.43861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.4675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.94
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.77915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.41
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.01464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.00326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1121 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1156016 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.273
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.273 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.75259
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.77528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.76689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.75205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.75497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.96915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 968 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 673620 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.104
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.104 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.00394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.0249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.79746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.7568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86271
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.06
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.062
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 888 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 554700 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.062
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.062 -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -291.3
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.03562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.677
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 905 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 594688 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.677
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.677 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.93
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.05798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.24
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.06139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 895 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 584108 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.651
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.651 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.01939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.356
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.22592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.23319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10887
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15168
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1053 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 926136 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.391
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.391 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.13587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.19299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1049 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 917292 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.048
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.048 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.2297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.14936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.615
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04868
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.869
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.221
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.827
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1069 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 958344 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.891
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.891 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.20311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16736
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.17302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.839
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1061 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 935884 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.839
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.839 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.16596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.1695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.64
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.18283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.681
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.33528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.34514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1056 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 915316 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.224
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.224 -291.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.224
protocols.moves.TrialCounter:    kic_refine_r1 trials=    389;  accepts= 0.3702;  energy_drop/trial=  -0.03455
protocols.moves.TrialCounter:    kic_refine_r2 trials=    395;  accepts= 0.3544;  energy_drop/trial=   0.01617
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.84550
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 129.141
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.873636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.914518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.35916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.7634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.75529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.91607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.89968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.83637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.83568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.49968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.19971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.25465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.131
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.50015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1186 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1337792 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.027
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.027 -289.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.48205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.663
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.59089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.60841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.582
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.5948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.58505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.365
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.61643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.61249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1234 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1477968 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.648
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.648 -289.732
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.72397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.73764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.75137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.7435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.7515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.74646
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.74354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.85331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.86451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.039
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94997
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.46
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.488
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1098 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1034976 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.488
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.488 -294.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.955
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04833
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.09
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1065 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1010312 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.106
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.106 -294.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.838
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.06
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.51
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.585
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1020 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 865916 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.585
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.585 -294.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.585
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.97954
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.99299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.01923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1012 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 899156 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.28
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.28 -294.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1469
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14484
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.29
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03101
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.31
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04364
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.766
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1091 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1026420 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.766
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.766 -294.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -294.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.327
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.99
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.096
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1251 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1423544 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.108
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.108 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.384
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1137 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1145804 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.384
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.384 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.01601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07937
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.13839
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.1547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.03877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.10416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.123
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1228 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1373272 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.123
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.123 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.123
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.28215
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.32874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.34053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1207 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1317592 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.739
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.739 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.878
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.25566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.26589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.14374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.15822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.12718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1223 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1331224 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.273
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.273 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.16704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.97236
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.89455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.128
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.89851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.87207
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.985
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1258 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1397328 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.985
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.985 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.985
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.98291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.98563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.042
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.00024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.96711
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1270 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1448624 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.415
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.415 -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -294.671
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21523
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03871
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.15
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1143 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1161384 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.731
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.731 -294.834
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08332
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.023
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.10197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.12282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.522
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1229 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1371544 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.522
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.522 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23603
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19869
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19728
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.113
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1200 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1299632 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.739
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.739 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21827
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.86
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22176
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.22214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22536
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.21313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.917
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1157 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1193468 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.917
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.917 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.914
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.22733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.24382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.951
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.23554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.2474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.37404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1168 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1194736 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.545
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.545 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -295.005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1110 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1106156 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -294.63
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -294.63 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -294.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.915
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35816
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.35814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1148 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1172656 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.969
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.969 -295.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.969
protocols.moves.TrialCounter:    kic_refine_r1 trials=    384;  accepts= 0.3307;  energy_drop/trial=  -0.02064
protocols.moves.TrialCounter:    kic_refine_r2 trials=    379;  accepts= 0.3615;  energy_drop/trial=  -0.02816
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.78166
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 98.1866
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.52242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.52612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.804
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.83048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.07202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.62478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.63297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.60978
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.86
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.42893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.36134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.36091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.35217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.532
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1069 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1020308 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -280.532
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -280.532 -282.804
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -280.532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.16492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.04874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0677
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.04837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99935
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.00958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.0048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.02257
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.47
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.601
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1076 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1038072 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.601
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.601 -283.601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.11389
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.09577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.162
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20512
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.34899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.85202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.84449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.14952
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.19513
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.19992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.78
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1092 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1002048 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -280.78
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -280.78 -284.462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -280.78
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.18604
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.20281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.1907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.87953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.99149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93042
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90422
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.883
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1092 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1012256 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.883
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.883 -289.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.89579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.90326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.8972
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.429
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.369
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.81849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1097 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1010508 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.246
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.246 -290.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.82865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.78449
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.88263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93105
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1092 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 996012 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.803
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.803 -290.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.9249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.861
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.70428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.71562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.23
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.83399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.84457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.95283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93727
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.9546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1088 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 993928 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.088
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.088 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.98175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.97549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.96281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.97648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.99268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.90814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.92976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.93244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.94382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.94
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1093 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 985808 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.941
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.941 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.02872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.07512
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.06027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.17083
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29496
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26299
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.25597
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.29704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.597
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.23028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.22349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.25348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1112 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1070696 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.141
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.141 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.25202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.1
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.25845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.33595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.33342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.34026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.3348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.18
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.35556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.91
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.18831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.19339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.651
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.20642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.17404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.16181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1060 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 984580 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.662
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.662 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.14698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.27
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.51705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.50316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.4997
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.822
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.50368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.46283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.245
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.46636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.46931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.068
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48472
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1102 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1065604 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.521
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.521 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.79
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.4017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.25498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.26751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.31344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.3087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.481
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.28744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.27273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.26735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.86
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.47266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.56976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.56752
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1101 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1056876 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.161
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.161 -291.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.49764
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.49654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.49598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.49574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.65401
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.66173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.08321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.07829
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.09832
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11766
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.2133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21471
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.22743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.24357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.24701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.467
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1080 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1047360 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.467
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.467 -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.23873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.25648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.18806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.19943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.18877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.159
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.573
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.21282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.19494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.175
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.21411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20529
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.17718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.18783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.17802
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.19118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.835
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1083 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1048292 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.835
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.835 -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.21902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21804
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.22798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.24354
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.996
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.23554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.2135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.21335
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.23115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.262
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.22448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.22845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.077
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1069 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1014460 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.077
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.077 -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.22413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.22487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.2223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.23226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.24373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.4001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.152
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.40568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.40539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.41193
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.225
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.39292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.39879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.30886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.464
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1081 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1048372 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.48
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.48 -294.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.48
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.3499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.36125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35906
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -294.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.36579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.501
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.36502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.37079
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.37598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.40231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.40165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.157
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.36716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.35508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.34888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.158
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1093 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1061180 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.24
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.24 -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.24
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.13564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.00072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.00411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.997
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.99858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.01115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.15421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.62
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.1608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.1058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.11736
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.899
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1089 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1062112 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.904
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.904 -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.17779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12989
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12045
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.12812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.14309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.925
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1087 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1059432 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.925
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.925 -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.14237
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.12124
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.562
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.16493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.252
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.17862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.968
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.21306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.20751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1084 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1054680 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -292.999
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -292.999 -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -292.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.1885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.20009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.09755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.10561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.10952
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.11791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.10443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.485
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.1088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -293.47
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1082 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1057140 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -293.47
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -293.47 -294.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -293.47
protocols.moves.TrialCounter:    kic_refine_r1 trials=    393;  accepts= 0.3791;  energy_drop/trial=  -0.01835
protocols.moves.TrialCounter:    kic_refine_r2 trials=    393;  accepts= 0.3613;  energy_drop/trial=  -0.02516
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.83526
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -137.627
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.775982
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.26636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.17311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.04577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.585
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.04584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.02772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.02145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.516
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.10298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.11126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.05081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.768
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.0693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60775
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.786
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 994 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 839644 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -277.746
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -277.746 -282.994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -277.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.33025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33939
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.78276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19898
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.19403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -277.716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.5355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.42
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.74922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.74194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.73867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.69319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.52
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.60699
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.6203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.6638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.55316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.56619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.56331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.68625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.68987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.042
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1130 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1188872 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.043
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.043 -286.156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.46519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.44451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.45146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.44883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.40534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.488
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.41453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.43974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.42366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.125
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.40194
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.52717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1087 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1026124 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.83
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.83 -286.83
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.83
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.51048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.50199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.47965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.48414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.48953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.29287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.39058
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.999
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.38214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.23363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.23099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.25099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.81
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.24368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.06813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.51948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.77754
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.643
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.72553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.67883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.69053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.461
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1040 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 919068 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.981
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.981 -287.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.67111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.68301
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.69334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.99665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.99265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.63
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.99054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.637
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.09146
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.371
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.3012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.2849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.25294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.45
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.1627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.18399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.19714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.19509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.83
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.20411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.14163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.351
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.32047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.31646
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.289
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1066 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1061840 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.289
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.289 -287.942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.32093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.31891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.32477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.578
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.37032
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.37703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.457
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.35623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.769
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.2918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.28807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.29398
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.93
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.60819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.66926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.379
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1051 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 974452 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.425
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.425 -288.306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6685
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.64494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.62855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.61667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.61545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.62739
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.61657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1070 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1023476 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.757
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.757 -288.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -288.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.61655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.61803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73831
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.75223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.76816
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.77248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.78505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.78437
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.825
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.78248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.77004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.77151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.27828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.084
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1013 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 904600 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.405
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.405 -288.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.32586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.3305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.33091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.33199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.32002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.32223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.2796
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.29161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.57
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.28344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.29723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.61184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.57594
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.116
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1068 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1043212 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.116
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.116 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.285
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.62885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.059
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.63074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.037
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.63588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.65184
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.65845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.64109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.64687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.64489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.256
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1036 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 949768 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.258
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.258 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.64366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.64277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.65029
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.61791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.703
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.56734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.56544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.57337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.956
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.58628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.57773
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.58098
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.59372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.59229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.77041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.77518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.77688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.7774
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.74155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73197
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.981
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1068 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1049896 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.981
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.981 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.72408
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.67
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72567
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.7274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.19
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.73619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.475
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.71791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72095
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.304
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.72358
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.71552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.73266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.72553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.70219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.43
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1044 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 993336 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.43
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.43 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.43
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.70244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.36
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.843
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.68167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.821
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67937
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.6792
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.67925
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.845
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1042 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 992784 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.845
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.845 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.48731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.49503
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.49231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.134
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.50453
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.53958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.275
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.52948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.52747
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.52995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.776
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.52958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.53003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.52226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.58246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.57543
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.57156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.55635
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.849
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.54577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.53727
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.5436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1062 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1035360 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.078
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.078 -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -288.686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.28553
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.27288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.27869
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.28902
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.29608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.29502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.29866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.29867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.33616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.33682
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.33326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.319
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.13361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.924
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1039 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 958768 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.991
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.991 -289.991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.991
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.13571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.13011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.715
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.13155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.11375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.11461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.11062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1028 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 940956 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.297
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.297 -290.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.11165
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.11075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.05741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.901
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.06026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.344
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.06474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1004 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 895264 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.904
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.904 -290.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.06903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.387
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.07806
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.09046
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.804
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.09106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.0757
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 7.07845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 7.07875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.76786
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1040 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 953928 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.631
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.631 -290.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.7719
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.77305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.77546
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.525
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.80785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.81368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.81357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.033
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.81473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.002
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.81296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.598
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.81745
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.805
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1028 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 937492 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.805
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.805 -290.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.84763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.378
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.8518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.19
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.8566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.86566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.93568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.93416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.93652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.93251
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.653
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.92618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.9395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.93601
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.642
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1031 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 935224 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -290.642
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -290.642 -290.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -290.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.94819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.58
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.68355
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.586
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.70522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.74311
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.008
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.74233
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.07
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.74274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.75791
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.904
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.75716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.71655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.669
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 6.75388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.75735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.75726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.75729
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 6.67607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1020 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 921004 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.144
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.144 -290.763
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.144
protocols.moves.TrialCounter:    kic_refine_r1 trials=    400;  accepts= 0.3550;  energy_drop/trial=  -0.03596
protocols.moves.TrialCounter:    kic_refine_r2 trials=    405;  accepts= 0.3407;  energy_drop/trial=   0.01430
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.90040
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: -120.632
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 7
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.812609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -273.141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.882911
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.22649
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.205
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.20633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.20505
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.986
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.21289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.145
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.15984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.23373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.21856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.292
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.39788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.019
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64667
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.143
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.78749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.026
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1133 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1119720 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.958
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.958 -284.958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.79047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.81036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.80141
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.79787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.79
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.21187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.636
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20983
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.721
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.24521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.23707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.23426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.24005
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.24605
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.96
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.22064
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.20316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.21535
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.19112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.397
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.18964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.118
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1272 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1522032 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.118
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.118 -287.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.09772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.03359
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.884
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.16192
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.1561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.15627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.14953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.993
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.13014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.206
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.15085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.98
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90975
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91263
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90056
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.168
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.39
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.486
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1292 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1558156 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.486
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.486 -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.9018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.8969
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.705
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91498
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9168
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.458
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8929
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.98109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.052
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.98116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.816
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.99055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.799
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1276 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1538928 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.518
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.518 -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.99417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.785
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68853
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.64324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67335
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.70126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.47646
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.50521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.526
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.67111
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.65012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.13273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.859
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.981
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1048 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 912880 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -279.981
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -279.981 -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -279.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.14734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18245
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.625
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.20799
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.42
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.15589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.19629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.23928
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.43
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.01276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.02166
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.00697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.01036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.018
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.00014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.662
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.91366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.004
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.91681
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.04
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.92495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.73137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.905
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.74
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.103
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.74082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.007
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1071 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 952720 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.007
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.007 -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.87295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.05174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.1403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.14418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.571
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.82377
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.85436
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.8753
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.1873
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.58
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.17348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.473
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.2393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.139
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 809 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 490000 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.139
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.139 -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -287.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.93232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.93295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89938
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91348
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.97596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.97556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9798
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.772
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94003
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.93842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91249
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91657
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91504
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.874
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1211 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1319952 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.874
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.874 -288.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.874
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90289
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.579
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.93109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.563
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.971
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83778
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.722
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83138
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83609
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.988
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1219 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1303364 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.551
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.551 -288.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.551
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.62403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.852
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.62588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.86
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.64424
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.72836
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72325
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.882
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.72427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.72658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.522
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.71122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.70434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.243
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.40756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.41038
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.40918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94398
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.78714
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.69644
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 945 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 653220 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.927
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.927 -288.25
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.927
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.12
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80935
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.788
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.135
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.79589
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.199
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.79894
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.77132
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90073
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.761
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.15035
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.15187
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.1416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.749
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06096
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.631
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1085 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1036300 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.29
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.631 -288.631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.11618
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09965
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.507
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.10241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08451
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.02492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.1407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.14614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.14903
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.612
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.15416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1094 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1027364 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.412
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.412 -289.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.23293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4377
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.22
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43734
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.43614
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.633
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.43686
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.577
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.44149
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.59
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50886
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51447
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.474
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.50741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51572
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.51856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.556
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.51863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.53171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.434
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1072 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 965440 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.434
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.434 -289.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.434
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.53074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.53104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.58467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.57362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.57511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.331
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.5807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.777
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.56647
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.395
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.56318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.869
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.4443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.88
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.3283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.31979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.44984
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.811
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1069 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 983304 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.006
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.006 -289.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -289.226
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.10641
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.104
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.08338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.0815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.338
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.04139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07979
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.691
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.0659
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.751
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.07034
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1092 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1017188 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.247
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.247 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06654
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.06781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.09228
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.575
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.08509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.0789
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52297
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.51
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52383
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.392
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51559
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.089
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.55624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.58665
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.58116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.822
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1084 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 990664 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.107
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.107 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.078
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61327
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61707
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.92
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.248
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60417
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.60716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.202
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54681
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.274
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.54031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.709
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.54086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.731
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1084 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 990820 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.731
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.731 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.61217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.65491
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.64054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.273
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59258
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.59879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.097
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.59044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.97
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.61178
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.6173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.163
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.94172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.32
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1238 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1424460 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.548
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.548 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9374
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.626
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.93758
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.738
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.9428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.48
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94716
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.28
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.95704
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.9942
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.246
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.93164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.107
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.92622
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.92294
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.90741
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91538
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.94599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.805
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1226 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1378460 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.805
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.805 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.95088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.96495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81167
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.195
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.60316
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.65
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.63036
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.001
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63689
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.427
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.949
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.6288
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.931
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.62518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.631
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62569
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.433
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.63041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.63298
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 990 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 754048 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.724
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.724 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.724
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63695
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.63119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.532
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.63815
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.587
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.61998
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62794
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.6
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.66835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.208
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.242
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.67787
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.39
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.68846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.591
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.68759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.64
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.69367
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.66592
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.392
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 994 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 751976 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.392
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.392 -289.415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.392
protocols.moves.TrialCounter:    kic_refine_r1 trials=    388;  accepts= 0.4021;  energy_drop/trial=  -0.02385
protocols.moves.TrialCounter:    kic_refine_r2 trials=    392;  accepts= 0.4133;  energy_drop/trial=   0.00286
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 0.9545;  energy_drop/trial=  -0.91830
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 81.2583
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 8
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.843022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 0.874856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.126
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.27881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.68
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.27602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.59502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.57899
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.58419
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.283
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.5621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.161
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.5795
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.172
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.57179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.108
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.57875
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.65375
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.60082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.917
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.60153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.32548
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31762
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.461
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.34506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.31826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.31544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.889
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.29486
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.34
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.30645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.2
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1065 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 918052 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -282.2
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -282.2 -282.706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -282.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.44913
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.186
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.44136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.062
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.46629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.53552
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.54851
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.683
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.54028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.54634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84632
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.047
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.8568
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.542
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87109
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.444
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.84014
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89596
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.80415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.531
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.511
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81179
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.291
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.011
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 838 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 527460 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.012
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.012 -283.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.012
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84048
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85565
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.85093
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.092
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83812
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.708
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85216
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.224
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.746
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86922
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.82608
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.55
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.8725
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.049
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87782
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.628
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88153
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.712
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 947 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 624692 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -284.712
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -284.712 -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -284.712
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86733
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.811
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90583
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.961
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91803
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.809
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89416
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.564
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.576
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91696
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.328
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81373
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.54
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81566
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.82495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.655
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81693
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.742
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.81648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.8106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.842
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 907 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 597296 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -282.702
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -282.702 -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -282.702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.599
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.664
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83203
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.602
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.78308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.73438
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.73557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.819
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.72645
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.69482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.943
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.12896
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.016
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.0394
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.694
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.0493
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.69
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79382
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.78362
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.634
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.80102
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.492
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.80426
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 987 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 813692 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -281.509
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -281.509 -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -281.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79361
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.908
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.76244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.72808
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.76
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.72611
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.61201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.61015
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.63066
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.502
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.75403
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.661
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49801
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.55
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.49731
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.085
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.50214
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.79118
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.675
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1007 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 842840 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -280.465
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -280.465 -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -280.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83514
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.83558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.19676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -276.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.99547
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.83244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.80963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.988
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.80918
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.007
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.82129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81855
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.981
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.3919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.295
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.38431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.39234
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.967
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.31174
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.239
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.30807
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.81
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1056 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 994284 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.81
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.81 -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.81
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 2  -285.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.573
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.86845
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.081
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.85948
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.86218
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.08
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87112
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.142
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.87352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.87264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.247
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88393
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88658
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.144
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.88818
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.743
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 20/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.89717
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.279
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1128 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1096556 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -283.305
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -283.305 -287.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -283.305
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.95652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.484
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.241
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.92084
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.158
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92232
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.85
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91384
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.89
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32076
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.069
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.30638
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.127
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.31399
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31674
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.95196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94966
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.557
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94462
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.182
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94009
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94697
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -283.907
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90253
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.957
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.897
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.94191
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.217
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94418
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.302
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1027 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 798428 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.302
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.302 -287.345
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.302
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91936
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.91607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.642
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.9137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.619
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.90837
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.89856
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.924
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.88976
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.781
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.90421
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.718
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92057
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.465
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1192 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1184992 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.52
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.52 -287.713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.52
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.94813
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.087
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.91497
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.92617
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.406
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.93053
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.204
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.77082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.209
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.76177
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.83368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.935
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.84189
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.76133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.467
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.77554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.78629
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.83114
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.81828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.945
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.75021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.688
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 1.76706
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.454
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.77091
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.054
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 1.7892
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.701
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.934
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42334
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.239
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1031 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 842184 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.37
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.37 -288.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.42223
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41606
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.044
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55995
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.55279
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.55483
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.78
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.52385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.759
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51702
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.315
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1034 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 842584 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.385
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.385 -288.37
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3919
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.074
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39537
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39863
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.05
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40041
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.515
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39541
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41595
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40219
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 120/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.893
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1107 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 971516 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.953
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.953 -288.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45368
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.432
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47962
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.21
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47846
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.349
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46748
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.50196
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.265
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.51446
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.26
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51479
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.50814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.308
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.53278
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.028
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.51944
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.783
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 2/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.52227
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.673
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.5115
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.506
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1109 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 987520 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.506
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.506 -288.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.506
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 3  -288.953
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39937
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40508
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38372
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.061
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36281
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.744
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36797
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38888
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.857
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.621
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4006
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.624
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.39814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4017
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.826
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40794
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.072
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38293
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.286
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38099
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.509
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38554
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.409
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.38464
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.405
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38213
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1036 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 865764 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.439
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.439 -289.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38639
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.413
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.272
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39063
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.448
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.39336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.379
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40337
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.40765
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.441
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41043
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.323
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.41065
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.959
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40588
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.155
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.41139
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.244
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4075
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.40824
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.624
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1039 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 867848 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.58
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.58 -289.094
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.58
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.4129
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.67
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.42133
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.627
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.46865
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47428
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.862
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47024
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.363
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.4723
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46352
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.726
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.49011
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.48183
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 60/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1033 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 867556 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.391
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.391 -290.086
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47616
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.46817
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.584
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.47646
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.47923
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.267
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.44814
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.45342
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.844
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 80/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.45025
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.77
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1030 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 861820 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -289.77
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -289.77 -290.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -289.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36264
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -289.698
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37912
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.324
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37847
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.201
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37329
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.027
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36284
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.346
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.35997
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.321
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.527
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36476
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 91/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 92/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 93/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 94/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36879
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.229
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37445
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.164
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 95/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3439
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.431
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34117
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.494
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 96/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.34478
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 97/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 98/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 99/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34266
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 100/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 997 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 849572 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.692
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.692 -291.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.692
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 101/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 102/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3423
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.396
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 103/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 104/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.34231
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.071
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 105/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.3574
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.255
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 106/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37088
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.391
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 107/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 108/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 109/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35581
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.33
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 110/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 111/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 112/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 113/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 114/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35994
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.336
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 115/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 116/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36713
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.858
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.38388
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.276
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 117/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.37151
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 118/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.33974
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 119/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 120/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 996 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 828268 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.347
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.347 -291.77
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.347
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 121/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.35185
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.623
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 122/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.37482
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.767
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 123/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.3755
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.977
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 124/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.36277
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.668
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.31487
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.122
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 125/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 126/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 127/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 128/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.32322
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.212
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32828
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.353
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 129/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 130/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.32459
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.4
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 131/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.30779
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -290.893
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 132/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48463
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.098
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 133/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 2.48909
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -292.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 134/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 135/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 136/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 137/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 138/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 139/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 3/3 140/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.49106
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -291.64
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1035 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 871412 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -291.64
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -291.64 -292.136
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -291.64
protocols.moves.TrialCounter:    kic_refine_r1 trials=    389;  accepts= 0.3573;  energy_drop/trial=  -0.05482
protocols.moves.TrialCounter:    kic_refine_r2 trials=    386;  accepts= 0.4067;  energy_drop/trial=   0.01808
protocols.moves.TrialCounter:           repack trials=     22;  accepts= 1.0000;  energy_drop/trial=  -0.88176
antibody2.AntibodyUtil: Utility: Checking Kink/Extended CDR H3 Base Angle
antibody2.AntibodyUtil: Base Dihedral: 136.924
antibody2.AntibodyUtil: Utility: Finished Checking Kink/Extended CDR H3 Base Angle: 0
protocols.antibody2.RefineOneCDRLoop:    Trying Refinement  ................. 9
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine init temp: 1.5
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refine final temp: 0.5
core.pack.task: Packer task: initialize from command line() 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: Not designing
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 1126 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 1005680 bytes
core.pack.task: Packer task: initialize from command line() 
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -272.73 -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: cycle: 1  -272.73
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 1/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 0.922256
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -275.499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 2.36679
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.881
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 2/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.27386
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.425
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49404
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.296
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 3/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.49022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.805
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.50866
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.341
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 4/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.4926
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.082
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 5/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50235
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.022
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.49867
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.495
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 6/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 7/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.50489
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.549
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.62116
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.148
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 8/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 9/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 10/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.59119
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.864
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.81545
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -282.154
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 11/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 12/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.06518
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 13/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.07343
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -280.992
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 14/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 15/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 16/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 5.1883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -278.211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 17/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 5.17326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -279.687
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 18/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.91544
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -281.211
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 19/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85973
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.499
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 20/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 912 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 589264 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -286.528
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -286.528 -286.528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -286.528
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 21/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 22/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 23/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 24/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 25/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 26/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 27/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.87877
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.407
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 28/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 29/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 30/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.24534
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.678
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 31/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.47077
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.443
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 32/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 33/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 34/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39891
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.38271
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.268
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 35/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 36/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 37/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 38/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32561
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.303
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 39/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33452
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.169
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.32756
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.656
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 40/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.29841
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.6
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 961 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 702816 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -287.613
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -287.613 -288.314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -287.613
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 41/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.28941
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.885
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 42/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.30314
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.835
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 43/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.41238
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.932
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 44/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39848
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.173
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 45/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39411
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.021
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 46/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 47/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.39735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.14
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.39055
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 48/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.38672
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.558
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 49/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.40031
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.245
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 50/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.33872
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.171
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.30648
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.313
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 51/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.29555
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.793
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 52/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20013
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.987
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.18306
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.147
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 53/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.18652
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.198
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 54/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 55/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.20946
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.307
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08385
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.771
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 56/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.07312
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.958
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 57/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.08366
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.676
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 58/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06735
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -284.539
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 59/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.0593
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.2
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 60/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06883
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.402
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 901 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 605280 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -285.402
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -285.402 -288.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -285.402
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 61/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.17254
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.455
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 62/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 63/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 64/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 65/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 66/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.1468
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.357
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 67/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.05477
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -285.916
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 68/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 69/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.21067
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 70/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.05963
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.895
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.06435
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.521
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 71/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.03156
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.607
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 72/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 73/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 74/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 75/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.02339
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -286.519
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 76/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 77/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.09282
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 78/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 79/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 80/140 
core.pack.interaction_graph.interaction_graph_factory: Instantiating DensePDInteractionGraph
core.pack.pack_rotamers: built 891 rotamers at 44 positions.
core.pack.pack_rotamers: IG: 594260 bytes
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after design: -288.137
protocols.moves.MonteCarlo: MonteCarlo:: last_accepted_score,lowest_score: -288.137 -288.318
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after repack: -288.137
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 81/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 4.06597
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.181
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 82/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 4.08684
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.309
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 83/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84964
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.412
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 84/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.84666
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.376
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 85/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 86/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 1 move on loop 1: 3.85414
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -288.326
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 87/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: RMS to native after accepted kinematic round 2 move on loop 1: 3.90415
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: energy after accepted move: -287.517
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 88/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 89/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 90/140 
protocols.loops.loop_mover.refine.LoopMover_Refine_KIC: refinement cycle (outer/inner): 1/3 91/140 
protocol