Module _protocols_motifs_

Classes

BuildPositionAP

BuildPositionCAP

IRCollectionCAP

LigandMotifSearch

LigandMotifSearchAP

LigandMotifSearchCAP

Motif

MotifAP

MotifCAP

MotifDnaPackerAP

MotifDnaPackerCAP

MotifDnaPackerCreator

MotifDnaPackerCreatorAP

MotifDnaPackerCreatorCAP

MotifHit

MotifLibraryCAP

__CPP_MotifDnaPackerCreator__

__CPP_MotifDnaPacker__

Functions

add_motif_bb_constraints

add_motif_sc_constraints

atom_specific_rms

backbone_stub_match

bools_from_sizes

build_rotamers_lite

defs2allowedtypes

defs2map

get_LigandMotifLibrary_user

get_MotifLibrary_user

get_motif_build_position_defs_user

get_motif_build_positions_user

get_target_position_map_make_dna_mutations

get_target_positions_make_dna_mutations

get_targetconformers_user

load_build_position_data

make_base_pair_mutation

make_dna_mutations

mutate_loops_for_search

mutate_position_vector_for_search

name3_from_oneletter

parallel_base_test

setup_conformer_map

single_ligand_motif_from_stream

single_motif_from_filename

single_motif_from_stream

single_residue_from_stream

Variables