Module _protocols_jd2_
Classes
AtomTreeDiffJobInputter
AtomTreeDiffJobInputterAP
AtomTreeDiffJobInputterCAP
AtomTreeDiffJobInputterCreator
AtomTreeDiffJobInputterCreatorAP
AtomTreeDiffJobInputterCreatorCAP
AtomTreeDiffJobOutputter
AtomTreeDiffJobOutputterAP
AtomTreeDiffJobOutputterCAP
AtomTreeDiffJobOutputterCreator
AtomTreeDiffJobOutputterCreatorAP
AtomTreeDiffJobOutputterCreatorCAP
BOINCJobDistributor
BOINCJobDistributorAP
BOINCJobDistributorCAP
BatchJobInputter
BatchJobInputterAP
BatchJobInputterCAP
CompareTags
CompareTagsAP
CompareTagsCAP
DebugOut_MpiFileBuffer
DebugOut_MpiFileBufferAP
DebugOut_MpiFileBufferCAP
FileJobOutputter
FileJobOutputterAP
FileJobOutputterCAP
FileSystemJobDistributor
FileSystemJobDistributorAP
FileSystemJobDistributorCAP
InnerJob
InnerJobAP
InnerJobCAP
InnerMultiThreadingJob
InnerMultiThreadingJobAP
InnerMultiThreadingJobCAP
JD2ResourceManager
JD2ResourceManagerAP
JD2ResourceManagerCAP
JD2ResourceManagerCreator
JD2ResourceManagerCreatorAP
JD2ResourceManagerCreatorCAP
JD2ResourceManagerJobInputter
JD2ResourceManagerJobInputterAP
JD2ResourceManagerJobInputterCAP
JD2ResourceManagerJobInputterCreator
JD2ResourceManagerJobInputterCreatorAP
JD2ResourceManagerJobInputterCreatorCAP
Job
JobAP
JobCAP
JobDistributor
JobDistributorAP
JobDistributorCAP
JobDistributorFactory
JobDistributorFactoryAP
JobDistributorFactoryCAP
JobInputter
JobInputterAP
JobInputterCAP
JobInputterCreator
JobInputterCreatorAP
JobInputterCreatorCAP
JobInputterFactory
JobInputterFactoryAP
JobInputterFactoryCAP
JobOutputter
JobOutputterAP
JobOutputterCAP
JobOutputterCreator
JobOutputterCreatorAP
JobOutputterCreatorCAP
JobOutputterFactory
JobOutputterFactoryAP
JobOutputterFactoryCAP
JobOutputterObserver
JobOutputterObserverAP
JobOutputterObserverCAP
LazySilentFileJobInputter
LazySilentFileJobInputterAP
LazySilentFileJobInputterCAP
LazySilentFileJobInputterCreator
LazySilentFileJobInputterCreatorAP
LazySilentFileJobInputterCreatorCAP
MPIFileBufJobDistributor
MPIFileBufJobDistributorAP
MPIFileBufJobDistributorCAP
MPIMultiCommJobDistributor
MPIMultiCommJobDistributorAP
MPIMultiCommJobDistributorCAP
MPIWorkPartitionJobDistributor
MPIWorkPartitionJobDistributorAP
MPIWorkPartitionJobDistributorCAP
MPIWorkPoolJobDistributor
MPIWorkPoolJobDistributorAP
MPIWorkPoolJobDistributorCAP
MSDJobDistributor
MSDJobDistributorAP
MSDJobDistributorCAP
MpiFileBuffer
MpiFileBufferAP
MpiFileBufferCAP
NoOutputJobOutputter
NoOutputJobOutputterAP
NoOutputJobOutputterCAP
NoOutputJobOutputterCreator
NoOutputJobOutputterCreatorAP
NoOutputJobOutputterCreatorCAP
PDBJobInputter
PDBJobInputterAP
PDBJobInputterCAP
PDBJobInputterCreator
PDBJobInputterCreatorAP
PDBJobInputterCreatorCAP
PDBJobOutputter
PDBJobOutputterAP
PDBJobOutputterCAP
PDBJobOutputterCreator
PDBJobOutputterCreatorAP
PDBJobOutputterCreatorCAP
Parser
ParserAP
ParserCAP
PoseInputStreamJobInputter
PoseInputStreamJobInputterAP
PoseInputStreamJobInputterCAP
PoseInputStreamJobInputterCreator
PoseInputStreamJobInputterCreatorAP
PoseInputStreamJobInputterCreatorCAP
ScoreMap
ScoreMapAP
ScoreMapCAP
ScoreOnlyJobOutputter
ScoreOnlyJobOutputterAP
ScoreOnlyJobOutputterCAP
ScoreOnlyJobOutputterCreator
ScoreOnlyJobOutputterCreatorAP
ScoreOnlyJobOutputterCreatorCAP
ScreeningJobInputter
ScreeningJobInputterAP
ScreeningJobInputterCAP
ScreeningJobInputterCreator
ScreeningJobInputterCreatorAP
ScreeningJobInputterCreatorCAP
ShuffleFileSystemJobDistributor
ShuffleFileSystemJobDistributorAP
ShuffleFileSystemJobDistributorCAP
SilentFileJobInputter
SilentFileJobInputterAP
SilentFileJobInputterCAP
SilentFileJobInputterCreator
SilentFileJobInputterCreatorAP
SilentFileJobInputterCreatorCAP
SilentFileJobOutputter
SilentFileJobOutputterAP
SilentFileJobOutputterCAP
SilentFileJobOutputterCreator
SilentFileJobOutputterCreatorAP
SilentFileJobOutputterCreatorCAP
SingleFileBuffer
SingleFileBufferAP
SingleFileBufferCAP
SingletonBase_T_basic_resource_manager_ResourceManager_T
SingletonBase_T_basic_resource_manager_ResourceManager_TAP
SingletonBase_T_basic_resource_manager_ResourceManager_TCAP
SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase_T_core_chemical_ChemicalManager_TAP
SingletonBase_T_core_chemical_ChemicalManager_TCAP
SingletonBase_T_protocols_jd2_JobInputterFactory_T
SingletonBase_T_protocols_jd2_JobInputterFactory_TAP
SingletonBase_T_protocols_jd2_JobInputterFactory_TCAP
SingletonBase_T_protocols_jd2_JobOutputterFactory_T
SingletonBase_T_protocols_jd2_JobOutputterFactory_TAP
SingletonBase_T_protocols_jd2_JobOutputterFactory_TCAP
WriteFileSFB
WriteFileSFBAP
WriteFileSFBCAP
WriteOut_MpiFileBuffer
WriteOut_MpiFileBufferAP
WriteOut_MpiFileBufferCAP
__CPP_AtomTreeDiffJobInputterCreator__
__CPP_AtomTreeDiffJobInputter__
__CPP_AtomTreeDiffJobOutputterCreator__
__CPP_AtomTreeDiffJobOutputter__
__CPP_BatchJobInputter__
__CPP_FileJobOutputter__
__CPP_InnerJob__
__CPP_JD2ResourceManagerJobInputterCreator__
__CPP_JD2ResourceManagerJobInputter__
__CPP_JobInputterCreator__
__CPP_JobInputter__
__CPP_JobOutputterCreator__
__CPP_JobOutputterObserver__
__CPP_JobOutputter__
__CPP_Job__
__CPP_LazySilentFileJobInputterCreator__
__CPP_LazySilentFileJobInputter__
__CPP_NoOutputJobOutputterCreator__
__CPP_NoOutputJobOutputter__
__CPP_PDBJobInputterCreator__
__CPP_PDBJobInputter__
__CPP_PDBJobOutputterCreator__
__CPP_PDBJobOutputter__
__CPP_Parser__
__CPP_PoseInputStreamJobInputterCreator__
__CPP_PoseInputStreamJobInputter__
__CPP_ScoreOnlyJobOutputterCreator__
__CPP_ScoreOnlyJobOutputter__
__CPP_ScreeningJobInputterCreator__
__CPP_ScreeningJobInputter__
__CPP_SilentFileJobInputterCreator__
__CPP_SilentFileJobInputter__
__CPP_SilentFileJobOutputterCreator__
__CPP_SilentFileJobOutputter__
__CPP_SingleFileBuffer__
__CPP_WriteFileSFB__
mpi_tags
Functions
add_job_data_to_ss
current_batch
current_output_filename
current_output_name
current_replica
get_current_job
get_current_jobs_starting_pose
jd2_used
output_intermediate_pose
register_options
set_native_in_mover
write_score_tracer
Variables
BAD_INPUT_TAG
JOB_GO_TAG
JOB_SUCCESS_TAG
NEW_JOB_ID_TAG
RECEIVE_MESSAGE_TAG
REQUEST_MESSAGE_TAG
__package__
[
hide private
]