Module _protocols_docking_
Classes
ConformerSwitchMover
ConformerSwitchMoverAP
ConformerSwitchMoverCAP
ConformerSwitchMoverCreator
ConformerSwitchMoverCreatorAP
ConformerSwitchMoverCreatorCAP
DockMCMCycle
DockMCMCycleAP
DockMCMCycleCAP
DockMCMProtocol
DockMCMProtocolAP
DockMCMProtocolCAP
DockMinMover
DockMinMoverAP
DockMinMoverCAP
DockSetupMover
DockSetupMoverAP
DockSetupMoverCAP
DockSetupMoverCreator
DockSetupMoverCreatorAP
DockSetupMoverCreatorCAP
DockTaskFactory
DockTaskFactoryAP
DockTaskFactoryCAP
DockingEnsemble
DockingEnsembleAP
DockingEnsembleCAP
DockingEnsemblePrepackProtocol
DockingEnsemblePrepackProtocolAP
DockingEnsemblePrepackProtocolCAP
DockingHighRes
DockingHighResAP
DockingHighResCAP
DockingHighResFilter
DockingHighResFilterAP
DockingHighResFilterCAP
DockingHighResLegacy
DockingHighResLegacyAP
DockingHighResLegacyCAP
DockingInitialPerturbation
DockingInitialPerturbationAP
DockingInitialPerturbationCAP
DockingInitialPerturbationCreator
DockingInitialPerturbationCreatorAP
DockingInitialPerturbationCreatorCAP
DockingLowRes
DockingLowResAP
DockingLowResCAP
DockingLowResEnsemble
DockingLowResEnsembleAP
DockingLowResEnsembleCAP
DockingLowResFilter
DockingLowResFilterAP
DockingLowResFilterCAP
DockingPrepackProtocol
DockingPrepackProtocolAP
DockingPrepackProtocolCAP
DockingProtocol
DockingProtocolAP
DockingProtocolCAP
DockingProtocolCreator
DockingProtocolCreatorAP
DockingProtocolCreatorCAP
DockingSlideIntoContact
DockingSlideIntoContactAP
DockingSlideIntoContactCAP
EllipsoidalRandomizationMover
EllipsoidalRandomizationMoverAP
EllipsoidalRandomizationMoverCAP
FaDockingSlideIntoContact
FaDockingSlideIntoContactAP
FaDockingSlideIntoContactCAP
InterfaceSidechainMinMover
InterfaceSidechainMinMoverAP
InterfaceSidechainMinMoverCAP
RigidBodyInfo
RigidBodyInfoAP
RigidBodyInfoCAP
SidechainMinMover
SidechainMinMoverAP
SidechainMinMoverCAP
SingletonBase_T_core_chemical_ChemicalManager_T
SingletonBase_T_core_chemical_ChemicalManager_TAP
SingletonBase_T_core_chemical_ChemicalManager_TCAP
TemperedDocking
TemperedDockingAP
TemperedDockingCAP
TemperedDockingCreator
TemperedDockingCreatorAP
TemperedDockingCreatorCAP
__CPP_ConformerSwitchMoverCreator__
__CPP_ConformerSwitchMover__
__CPP_DockMCMCycle__
__CPP_DockMCMProtocol__
__CPP_DockMinMover__
__CPP_DockSetupMoverCreator__
__CPP_DockSetupMover__
__CPP_DockingEnsemblePrepackProtocol__
__CPP_DockingHighResFilter__
__CPP_DockingHighResLegacy__
__CPP_DockingHighRes__
__CPP_DockingInitialPerturbationCreator__
__CPP_DockingInitialPerturbation__
__CPP_DockingLowResEnsemble__
__CPP_DockingLowResFilter__
__CPP_DockingLowRes__
__CPP_DockingPrepackProtocol__
__CPP_DockingProtocolCreator__
__CPP_DockingProtocol__
__CPP_DockingSlideIntoContact__
__CPP_EllipsoidalRandomizationMover__
__CPP_FaDockingSlideIntoContact__
__CPP_InterfaceSidechainMinMover__
__CPP_SidechainMinMover__
__CPP_TemperedDockingCreator__
__CPP_TemperedDocking__
Functions
calc_CA_Irmsd
calc_Fnat
calc_Fnonnat
calc_Irmsd
calc_Lrmsd
calc_interaction_energy
calc_res_contact
setup_foldtree
Variables
__package__
[
hide private
]