Module chemical

Variables

ACETYLAMINO_SUGAR
ACETYLATED_NTERMINUS
ACETYLATED_NTERMINUS_VARIANT
ACETYLATION
ACETYL_SUGAR
ADDUCT
ADDUCT_VARIANT
ALDONIC_ACID
ALDONIC_ACID_VARIANT
ALDOSE
ALPHA_AA
ALPHA_SUGAR
ALTERNATIVE_PROTONATION
AMINO_SUGAR
AROMATIC
AromaticBond
BETA_AA
BETA_SUGAR
BRANCH_LOWER_TERMINUS
BRANCH_LOWER_TERMINUS_VARIANT
BRANCH_POINT
BULGE
BondInRing
BondNotInRing
C1_ACETYLAMINO_SUGAR
C1_AMINO_SUGAR
C1_BRANCH_POINT
C1_DEOXY_SUGAR
C1_MODIFIED
C1_PHOSPHATE
C2_ACETYLAMINO_SUGAR
C2_AMINO_SUGAR
C2_BRANCH_POINT
C2_DEOXY_SUGAR
C2_KETOALDONIC_ACID
C2_MODIFIED
C2_PHOSPHATE
C3_ACETYLAMINO_SUGAR
C3_AMINO_SUGAR
C3_BRANCH_POINT
C3_DEOXY_SUGAR
C3_KETOALDONIC_ACID
C3_MODIFIED
C3_PHOSPHATE
C4_ACETYLAMINO_SUGAR
C4_AMINO_SUGAR
C4_BRANCH_POINT
C4_DEOXY_SUGAR
C4_KETOALDONIC_ACID
C4_MODIFIED
C4_PHOSPHATE
C5_ACETYLAMINO_SUGAR
C5_AMINO_SUGAR
C5_BRANCH_POINT
C5_DEOXY_SUGAR
C5_KETOALDONIC_ACID
C5_MODIFIED
C5_PHOSPHATE
C6_ACETYLAMINO_SUGAR
C6_AMINO_SUGAR
C6_BRANCH_POINT
C6_DEOXY_SUGAR
C6_KETOALDONIC_ACID
C6_MODIFIED
C6_PHOSPHATE
C7_ACETYLAMINO_SUGAR
C7_AMINO_SUGAR
C7_BRANCH_POINT
C7_DEOXY_SUGAR
C7_KETOALDONIC_ACID
C7_MODIFIED
C7_PHOSPHATE
C8_ACETYLAMINO_SUGAR
C8_AMINO_SUGAR
C8_BRANCH_POINT
C8_DEOXY_SUGAR
C8_KETOALDONIC_ACID
C8_MODIFIED
C8_PHOSPHATE
C9_ACETYLAMINO_SUGAR
C9_AMINO_SUGAR
C9_BRANCH_POINT
C9_DEOXY_SUGAR
C9_MODIFIED
C9_PHOSPHATE
CARBOHYDRATE
CARBOXYLATION
CENTROID_HA
CHARGED
COARSE
CTERM_CONNECT
CUTPOINT_LOWER
CUTPOINT_UPPER
CYCLIC
C_METHYLAMIDATION
ConjugableBond
DEOXY_SUGAR
DEPROTONATED
DIIODINATION
DIMETHYLATION
DISULFIDE
DISULFIDE_BONDED
DNA
D_AA
D_SUGAR
DoubleBond
DoubleBondOrder
EIsometry
FIRST_PROPERTY
FIRST_VARIANT
FIVE_PRIME_END_OH
FIVE_PRIME_END_PHOSPHATE
FIVE_PRIME_PACKABLE_PHOSPHATE
FIVE_PRIME_PHOSPHATE
FORMS_DISULFIDE_BOND
FURANOSE
GAMMA_AA
GLYCOSIDE
HBS_POST
HBS_PRE
HYBRID_MAX
HYDROXYLATION
HYDROXYLATION1
HYDROXYLATION2
IsAromaticBond
KETOSE
LIGAND
LIPID
LOWERTERM_TRUNC
LOWERTERM_TRUNC_VARIANT
LOWER_TERMINUS
LOWER_TERMINUS_VARIANT
L_AA
L_SUGAR
MEMBRANE
METAL
METALBINDING
METHYLATED_CTERMINUS
METHYLATED_CTERMINUS_VARIANT
METHYLATED_NTERM_VARIANT
METHYLATION
METHYL_GLYCOSIDE
NE2_CONNECT
NTERM_CONNECT
N_ACETYLATION
N_PROPERTIES
N_VARIANTS
NoBondIsometry
NonaromaticBond
NotConjugableBond
OOP_POST
OOP_PRE
OXETOSE
OXIROSE
OrbitalBond
OrbitalBondOrder
PEPTOID
PHI
PHOSPHATE
PHOSPHONATE
PHOSPHONATE_UPPER
PHOSPHONATE_UPPER_VARIANT
PHOSPHORYLATION
POLAR
POLYMER
PROTEIN
PROTONATED
PROTONATED_H1_ADENOSINE
PYRANOSE
PseudoBondOrder
REPLONLY
RING_HYBRID
RNA
SC_BRANCH_POINT
SC_FRAGMENT
SC_ORBITALS
SEPTANOSE
SG_CONNECT
SHOVE_BB
SIALIC_ACID
SIDECHAIN_CONJUGATION
SP2_HYBRID
SP3_HYBRID
SPECIAL_ROT
SRI
SULFATION
SURFACE
SingleBond
SingleBondOrder
TAUTOMER
THETA
THREE_PRIME_END_OH
THREE_PRIME_PACKABLE_PHOSPHATE
THREE_PRIME_PHOSPHATE
TRIAZOLEMER
TRIMETHYLATION
TripleBond
TripleBondOrder
UNKNOWN_HYBRID
UPPERTERM_TRUNC
UPPERTERM_TRUNC_VARIANT
UPPER_TERMINUS
UPPER_TERMINUS_VARIANT
URONIC_ACID
URONIC_ACID_VARIANT
UnknownAromaticity
UnknownBond
UnknownBondOrder
UnknownConjugability
UnknownIsometry
UnknownRingness
VIRTUAL_BACKBONE_EXCEPT_C1PRIME
VIRTUAL_BASE
VIRTUAL_BASE_HEAVY_ATOM
VIRTUAL_BB
VIRTUAL_DNA_PHOSPHATE
VIRTUAL_NTERM
VIRTUAL_O2PRIME_HYDROGEN
VIRTUAL_PHOSPHATE
VIRTUAL_RESIDUE
VIRTUAL_RESIDUE_VARIANT
VIRTUAL_RIBOSE
VIRTUAL_RNA_RESIDUE
VIRTUAL_RNA_RESIDUE_EXCLUDE_PHOSPHATE
VIRTUAL_SIDE_CHAIN
WATER
ZIsometry
ZN_CONNECT
__package__
aa_ala
aa_arg
aa_asn
aa_asp
aa_b3a
aa_b3c
aa_b3cisACHC
aa_b3cisACPC
aa_b3cisACPrC
aa_b3d
aa_b3e
aa_b3f
aa_b3g
aa_b3h
aa_b3i
aa_b3k
aa_b3l
aa_b3m
aa_b3n
aa_b3p
aa_b3q
aa_b3r
aa_b3s
aa_b3t
aa_b3v
aa_b3w
aa_b3y
aa_cys
aa_dal
aa_dan
aa_dar
aa_das
aa_dcs
aa_dgn
aa_dgu
aa_dhi
aa_dil
aa_dle
aa_dly
aa_dme
aa_dph
aa_dpr
aa_dse
aa_dth
aa_dtr
aa_dty
aa_dva
aa_gln
aa_glu
aa_gly
aa_h2o
aa_his
aa_ile
aa_leu
aa_lys
aa_met
aa_phe
aa_pro
aa_ser
aa_thr
aa_trp
aa_tyr
aa_unk
aa_unp
aa_val
aa_vrt
first_DNA_aa
first_D_aa
first_beta3_aa
last_DNA_aa
last_D_aa
last_beta3_aa
na_ade
na_cyt
na_gua
na_rad
na_rcy
na_rgu
na_thy
na_ura
num_aa_types
num_canonical_aas
q